Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 5
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87212 | Canola | plastid | 74.01 | 75.51 |
| Bra035931.1-P | Field mustard | mitochondrion | 74.01 | 74.81 |
| VIT_17s0000g06480.t01 | Wine grape | cytosol | 20.03 | 48.16 |
| KRH54581 | Soybean | mitochondrion | 34.4 | 42.29 |
| Zm00001d020436_P001 | Maize | mitochondrion | 33.64 | 34.65 |
| Solyc06g069700.2.1 | Tomato | plastid | 42.05 | 34.12 |
| Os09t0417500-01 | Rice | mitochondrion | 31.96 | 33.82 |
| EER96725 | Sorghum | mitochondrion, plastid | 32.87 | 33.75 |
| TraesCS5A01G229600.1 | Wheat | mitochondrion | 31.04 | 32.74 |
| HORVU5Hr1G066340.2 | Barley | mitochondrion | 31.04 | 32.74 |
| HORVU0Hr1G013090.3 | Barley | cytosol, plastid | 28.59 | 32.3 |
| TraesCS5B01G228400.1 | Wheat | plastid | 31.5 | 31.69 |
| TraesCS5D01G237900.1 | Wheat | plastid | 31.35 | 30.97 |
| AT4G11690.1 | Thale cress | endoplasmic reticulum | 20.8 | 24.03 |
| AT2G32630.1 | Thale cress | mitochondrion, plastid | 22.32 | 23.4 |
| AT2G01740.1 | Thale cress | cytosol | 19.88 | 23.26 |
| AT1G05670.3 | Thale cress | mitochondrion | 25.54 | 22.54 |
| AT2G15630.1 | Thale cress | mitochondrion | 20.95 | 21.85 |
| AT5G39710.1 | Thale cress | mitochondrion | 24.16 | 21.15 |
| AT1G22960.1 | Thale cress | mitochondrion | 22.48 | 20.47 |
| AT5G38730.1 | Thale cress | cytosol | 18.65 | 20.47 |
| AT1G09820.1 | Thale cress | mitochondrion, plastid | 18.96 | 20.46 |
| AT5G40400.2 | Thale cress | cytosol | 20.8 | 19.97 |
| AT1G09680.1 | Thale cress | mitochondrion | 18.5 | 19.93 |
| AT2G02150.1 | Thale cress | mitochondrion, plastid | 23.09 | 19.84 |
| AT5G01110.2 | Thale cress | cytosol, plastid | 22.78 | 19.68 |
| AT4G19890.1 | Thale cress | plastid | 20.49 | 19.12 |
| AT2G16880.1 | Thale cress | cytosol | 21.25 | 18.71 |
| AT1G11710.1 | Thale cress | mitochondrion | 18.2 | 18.11 |
| AT4G26680.1 | Thale cress | mitochondrion | 14.07 | 17.66 |
| AT2G19280.1 | Thale cress | mitochondrion | 18.04 | 17.03 |
| AT2G28050.1 | Thale cress | cytosol, plastid | 11.47 | 16.23 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | EntrezGene:836261 | UniProt:A0A178UEG8 | ProteinID:AED97462.1 | ArrayExpress:AT5G61400 |
| EnsemblPlantsGene:AT5G61400 | RefSeq:AT5G61400 | TAIR:AT5G61400 | RefSeq:AT5G61400-TAIR-G | EnsemblPlants:AT5G61400.1 | TAIR:AT5G61400.1 |
| Unigene:At.55661 | ProteinID:BAB08495.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0004518 | GO:GO:0004519 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009451 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0043231 | GO:GO:0090305 | InterPro:IPR002885 | InterPro:IPR011990 | RefSeq:NP_200948.1 |
| ProteinID:OAO92296.1 | PFAM:PF12854 | PFAM:PF13041 | PO:PO:0001078 | PO:PO:0007057 | PO:PO:0009010 |
| PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF793 | InterPro:Pentatricopeptide_repeat | UniProt:Q9FLJ4 | SUPFAM:SSF81901 |
| TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI00000A2370 | SEG:seg | : | : |
Description
Pentatricopeptide repeat-containing protein At5g61400 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLJ4]
Coordinates
chr5:+:24681550..24683514
Molecular Weight (calculated)
74444.7 Da
IEP (calculated)
7.746
GRAVY (calculated)
0.026
Length
654 amino acids
Sequence
(BLAST)
(BLAST)
001: MLKLLLPQHR TSVYLFKFQF FNFRFLSQSP SLSNSASSFS SSSLAEAILK CRSAEEAFKL FETSSRSRVS KSNDLQSFSA VIHVLTGAHK YTLARCLIKS
101: LIERLKRHSE PSNMSHRLFN ALEDIQSPKF SIGVFSLLIM EFLEMGLFEE ALWVSREMKC SPDSKACLSI LNGLVRRRRF DSVWVDYQLM ISRGLVPDVH
201: IYFVLFQCCF KQGLYSKKEK LLDEMTSLGI KPNVYIYTIY ILDLCRDNKM EEAEKMFELM KKHGVLPNLY TYSAMIDGYC KTGNVRQAYG LYKEILVAEL
301: LPNVVVFGTL VDGFCKAREL VTARSLFVHM VKFGVDPNLY VYNCLIHGHC KSGNMLEAVG LLSEMESLNL SPDVFTYTIL INGLCIEDQV AEANRLFQKM
401: KNERIFPSSA TYNSLIHGYC KEYNMEQALD LCSEMTASGV EPNIITFSTL IDGYCNVRDI KAAMGLYFEM TIKGIVPDVV TYTALIDAHF KEANMKEALR
501: LYSDMLEAGI HPNDHTFACL VDGFWKEGRL SVAIDFYQEN NQQRSCWNHV GFTCLIEGLC QNGYILRASR FFSDMRSCGI TPDICSYVSM LKGHLQEKRI
601: TDTMMLQCDM IKTGILPNLL VNQLLARFYQ ANGYVKSACF LTNSSRLKTV SNSC
101: LIERLKRHSE PSNMSHRLFN ALEDIQSPKF SIGVFSLLIM EFLEMGLFEE ALWVSREMKC SPDSKACLSI LNGLVRRRRF DSVWVDYQLM ISRGLVPDVH
201: IYFVLFQCCF KQGLYSKKEK LLDEMTSLGI KPNVYIYTIY ILDLCRDNKM EEAEKMFELM KKHGVLPNLY TYSAMIDGYC KTGNVRQAYG LYKEILVAEL
301: LPNVVVFGTL VDGFCKAREL VTARSLFVHM VKFGVDPNLY VYNCLIHGHC KSGNMLEAVG LLSEMESLNL SPDVFTYTIL INGLCIEDQV AEANRLFQKM
401: KNERIFPSSA TYNSLIHGYC KEYNMEQALD LCSEMTASGV EPNIITFSTL IDGYCNVRDI KAAMGLYFEM TIKGIVPDVV TYTALIDAHF KEANMKEALR
501: LYSDMLEAGI HPNDHTFACL VDGFWKEGRL SVAIDFYQEN NQQRSCWNHV GFTCLIEGLC QNGYILRASR FFSDMRSCGI TPDICSYVSM LKGHLQEKRI
601: TDTMMLQCDM IKTGILPNLL VNQLLARFYQ ANGYVKSACF LTNSSRLKTV SNSC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.