Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G229600.1 | Wheat | mitochondrion | 92.31 | 96.77 |
| HORVU5Hr1G066340.2 | Barley | mitochondrion | 90.77 | 95.16 |
| TraesCS5D01G237900.1 | Wheat | plastid | 95.23 | 93.5 |
| HORVU0Hr1G013090.3 | Barley | cytosol, plastid | 80.15 | 89.98 |
| Os09t0417500-01 | Rice | mitochondrion | 70.92 | 74.6 |
| EER96725 | Sorghum | mitochondrion, plastid | 68.92 | 70.33 |
| Zm00001d020436_P001 | Maize | mitochondrion | 68.62 | 70.24 |
| VIT_17s0000g06480.t01 | Wine grape | cytosol | 18.15 | 43.38 |
| KRH54581 | Soybean | mitochondrion | 28.77 | 35.15 |
| CDX87212 | Canola | plastid | 32.15 | 32.61 |
| AT5G61400.1 | Thale cress | mitochondrion | 31.69 | 31.5 |
| Bra035931.1-P | Field mustard | mitochondrion | 31.23 | 31.38 |
| Solyc06g069700.2.1 | Tomato | plastid | 36.92 | 29.78 |
| TraesCS2B01G355200.1 | Wheat | plastid | 20.92 | 25.95 |
| TraesCS4B01G280500.1 | Wheat | plastid | 22.15 | 24.53 |
| TraesCS2B01G133900.1 | Wheat | plastid | 19.69 | 23.79 |
| TraesCS5B01G127400.1 | Wheat | plastid | 23.54 | 22.77 |
| TraesCS1B01G176600.2 | Wheat | mitochondrion | 20.0 | 22.15 |
| TraesCS2B01G273600.1 | Wheat | plastid | 24.15 | 21.05 |
| TraesCS7B01G267600.1 | Wheat | mitochondrion | 19.85 | 20.48 |
| TraesCS7B01G036200.1 | Wheat | mitochondrion | 20.31 | 19.76 |
| TraesCS7B01G006900.1 | Wheat | plastid | 20.92 | 19.57 |
| TraesCS2B01G345200.1 | Wheat | mitochondrion | 17.85 | 19.05 |
| TraesCS3B01G225400.1 | Wheat | cytosol, mitochondrion | 16.62 | 18.85 |
| TraesCS6B01G408200.1 | Wheat | plastid | 16.92 | 18.43 |
| TraesCS2B01G343000.1 | Wheat | cytosol, plastid | 13.69 | 17.73 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G228400.1 | EnsemblPlantsGene:TraesCS5B01G228400 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002885 | InterPro:IPR011990 | InterPro:Pentatricopeptide_repeat | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF793 |
| PFAM:PF12854 | PFAM:PF13041 | PFscan:PS51375 | SEG:seg | SUPFAM:SSF48452 | SUPFAM:SSF81901 |
| TIGRFAMs:TIGR00756 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:405552674..405554626
Molecular Weight (calculated)
70612.7 Da
IEP (calculated)
8.384
GRAVY (calculated)
0.046
Length
650 amino acids
Sequence
(BLAST)
(BLAST)
001: MVANPVSQIP QTNRSSRAVQ ICRLANANPM PLSPPLRLIL SSRRRPLATH HRCLSSSAAA VAAATPATSR DRAAHLAAAV HGSAAAKNFA HAIRLTKSLV
101: QASSPGARPG AAAFAALAST SSSPGPALGV LVIALSQMAL HDEALSVFHR LPTLPALPAC NAILDVLVKA HRFDRVWKLF DEMLSRGMAP TVVTYNTLIN
201: ACRHEGAVAK AREVWKQMLA RLIGPNVVTY STMISALCDE GCIAEAERLF LTMKETGMRP NHYTYNALMS SHCKRDGIKR ALTLYQELLK SGLVPNAVIF
301: TTLIDGFFQV NRTSDAKNIF LDMHRYGVAP TVPVYNSLID GAFRSGDSQE ALTVYEDMTR LGLCPDEFTC SIVVRGLCSG GQVKVAARFL EAMQQSGINL
401: NAAAYNALID EYCKNGNLAE ALATCTIMSE VGIEPNVVTY SSLIDGHSKK GKMEIAMAIY TEMIAKGVEP NVLTYTALIH GHAKDGDINA AFRLQKEMAE
501: KGISPNSVTV SVLVDGLCRE NRIQDAVMIF MKHSGQKKHA DIRTCLSNST TEEDHSIPNS VTYMTLIYGL YLDGQYREAG KFFSCMRESG MVPDSFTYSL
601: LIRGQCMLGY VLNAMMLYAD MVKVGVKPMT TVCPDIWSRD APNDLKTVET
101: QASSPGARPG AAAFAALAST SSSPGPALGV LVIALSQMAL HDEALSVFHR LPTLPALPAC NAILDVLVKA HRFDRVWKLF DEMLSRGMAP TVVTYNTLIN
201: ACRHEGAVAK AREVWKQMLA RLIGPNVVTY STMISALCDE GCIAEAERLF LTMKETGMRP NHYTYNALMS SHCKRDGIKR ALTLYQELLK SGLVPNAVIF
301: TTLIDGFFQV NRTSDAKNIF LDMHRYGVAP TVPVYNSLID GAFRSGDSQE ALTVYEDMTR LGLCPDEFTC SIVVRGLCSG GQVKVAARFL EAMQQSGINL
401: NAAAYNALID EYCKNGNLAE ALATCTIMSE VGIEPNVVTY SSLIDGHSKK GKMEIAMAIY TEMIAKGVEP NVLTYTALIH GHAKDGDINA AFRLQKEMAE
501: KGISPNSVTV SVLVDGLCRE NRIQDAVMIF MKHSGQKKHA DIRTCLSNST TEEDHSIPNS VTYMTLIYGL YLDGQYREAG KFFSCMRESG MVPDSFTYSL
601: LIRGQCMLGY VLNAMMLYAD MVKVGVKPMT TVCPDIWSRD APNDLKTVET
001: MLKLLLPQHR TSVYLFKFQF FNFRFLSQSP SLSNSASSFS SSSLAEAILK CRSAEEAFKL FETSSRSRVS KSNDLQSFSA VIHVLTGAHK YTLARCLIKS
101: LIERLKRHSE PSNMSHRLFN ALEDIQSPKF SIGVFSLLIM EFLEMGLFEE ALWVSREMKC SPDSKACLSI LNGLVRRRRF DSVWVDYQLM ISRGLVPDVH
201: IYFVLFQCCF KQGLYSKKEK LLDEMTSLGI KPNVYIYTIY ILDLCRDNKM EEAEKMFELM KKHGVLPNLY TYSAMIDGYC KTGNVRQAYG LYKEILVAEL
301: LPNVVVFGTL VDGFCKAREL VTARSLFVHM VKFGVDPNLY VYNCLIHGHC KSGNMLEAVG LLSEMESLNL SPDVFTYTIL INGLCIEDQV AEANRLFQKM
401: KNERIFPSSA TYNSLIHGYC KEYNMEQALD LCSEMTASGV EPNIITFSTL IDGYCNVRDI KAAMGLYFEM TIKGIVPDVV TYTALIDAHF KEANMKEALR
501: LYSDMLEAGI HPNDHTFACL VDGFWKEGRL SVAIDFYQEN NQQRSCWNHV GFTCLIEGLC QNGYILRASR FFSDMRSCGI TPDICSYVSM LKGHLQEKRI
601: TDTMMLQCDM IKTGILPNLL VNQLLARFYQ ANGYVKSACF LTNSSRLKTV SNSC
101: LIERLKRHSE PSNMSHRLFN ALEDIQSPKF SIGVFSLLIM EFLEMGLFEE ALWVSREMKC SPDSKACLSI LNGLVRRRRF DSVWVDYQLM ISRGLVPDVH
201: IYFVLFQCCF KQGLYSKKEK LLDEMTSLGI KPNVYIYTIY ILDLCRDNKM EEAEKMFELM KKHGVLPNLY TYSAMIDGYC KTGNVRQAYG LYKEILVAEL
301: LPNVVVFGTL VDGFCKAREL VTARSLFVHM VKFGVDPNLY VYNCLIHGHC KSGNMLEAVG LLSEMESLNL SPDVFTYTIL INGLCIEDQV AEANRLFQKM
401: KNERIFPSSA TYNSLIHGYC KEYNMEQALD LCSEMTASGV EPNIITFSTL IDGYCNVRDI KAAMGLYFEM TIKGIVPDVV TYTALIDAHF KEANMKEALR
501: LYSDMLEAGI HPNDHTFACL VDGFWKEGRL SVAIDFYQEN NQQRSCWNHV GFTCLIEGLC QNGYILRASR FFSDMRSCGI TPDICSYVSM LKGHLQEKRI
601: TDTMMLQCDM IKTGILPNLL VNQLLARFYQ ANGYVKSACF LTNSSRLKTV SNSC
Arabidopsis Description
Pentatricopeptide repeat-containing protein At5g61400 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLJ4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.