Factsheet for TraesCS7B01G267600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G362900.1	Wheat	mitochondrion	92.7	94.35
TraesCS7A01G360200.1	Wheat	mitochondrion	88.1	79.29
HORVU7Hr1G087760.14	Barley	cytosol, mitochondrion	82.22	74.96
Os06t0565000-00	Rice	mitochondrion	72.86	66.14
Zm00001d023302_P001	Maize	mitochondrion	71.9	64.71
KXG22891	Sorghum	mitochondrion	57.46	61.88
GSMUA_Achr1P06500_001	Banana	cytosol	40.0	49.41
VIT_01s0010g01780.t01	Wine grape	cytosol	39.05	44.24
CDY17611	Canola	cytosol	35.08	37.27
PGSC0003DMT400043860	Potato	endoplasmic reticulum, golgi	40.95	33.9
PGSC0003DMT400043863	Potato	endoplasmic reticulum, golgi	40.95	33.9
KRH42458	Soybean	plastid	40.32	33.82
Solyc02g021280.1.1	Tomato	endoplasmic reticulum	40.63	33.73
AT2G02150.1	Thale cress	mitochondrion, plastid	38.57	31.93
CDY03072	Canola	mitochondrion	37.3	31.93
KRH58559	Soybean	plastid	29.37	31.57
Bra024831.1-P	Field mustard	mitochondrion	36.51	31.42
TraesCS4B01G280500.1	Wheat	plastid	23.33	25.04
TraesCS2B01G133900.1	Wheat	plastid	20.79	24.35
TraesCS2B01G355200.1	Wheat	plastid	19.84	23.86
TraesCS1B01G176600.2	Wheat	mitochondrion	21.43	23.0
TraesCS5B01G127400.1	Wheat	plastid	23.33	21.88
TraesCS7B01G006900.1	Wheat	plastid	23.97	21.73
TraesCS2B01G345200.1	Wheat	mitochondrion	20.16	20.85
TraesCS6B01G408200.1	Wheat	plastid	18.89	19.93
TraesCS5B01G228400.1	Wheat	plastid	20.48	19.85
TraesCS2B01G273600.1	Wheat	plastid	23.17	19.57
TraesCS2B01G343000.1	Wheat	cytosol, plastid	15.56	19.52
TraesCS7B01G036200.1	Wheat	mitochondrion	20.32	19.16
TraesCS3B01G225400.1	Wheat	cytosol, mitochondrion	15.24	16.75

Protein Annotations

EnsemblPlants:TraesCS7B01G267600.1	EnsemblPlantsGene:TraesCS7B01G267600	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	ncoils:Coil	PANTHER:PTHR24015
PANTHER:PTHR24015:SF329	PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	SEG:seg	SUPFAM:SSF81901
TIGRFAMs:TIGR00756	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:490606289..490608609

Molecular Weight (calculated)

64689.0 Da

IEP (calculated)

7.009

GRAVY (calculated)

0.069

Length

630 amino acids

Sequence
(BLAST)

001: MLPLPLRRHL LFIYSRRNPS FIPFSIAATA ISTLPTDSAA TAAAATPISD RLRXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXLLSRL
101: LAPGHRPHLA ASLVDLLHRA ALALGPRRSA LPSVVDTLLS LLADRGFLDD AVLALGRVRE LRVPPNTRTC NHILLRLARE RRGALVRRLF EQVPAPNVFT
201: FNIVIDFLCK EGELAEARAL FSRMKAIGCP PDVVTYNSLI DGCGKCGELE EVEQLVGEMR GCGCTPDVVT YNALVNCFCK FGRMERAYSY FAEMKREGVI
301: ANIRTYSTFV DAFCKKGMVR EAMKLFAQMR IRGMTPNEVT YTCLVDGTFK AGRLDDAFVL IDEMVQQGVP LNVVTYTVQV DGLCKEGKIA EAEDVFRLME
401: KAGDKANELL YTTLIHGHFM NKNKGKESEA IALLHKMQDS GFQLNVVTYC ALVDGLCKAG SVDEAVSHFN KMRDLGLEPN VHIYTALIDG LCKNGCLTKA
501: VALLDEMADK GLSLDKVVYT SLMDGYLKQG NLQDAFALKA KMINSGLQLD LYGYTCFVWG FCNLNMMQEA REVLSEMIGN GITPDTVIYN CLISKYQKLG
601: HIEEAASLQN EMESVLPSCT IGGTAPGSDG

Best Arabidopsis Sequence Match ( AT2G02150.2 )
(BLAST)

001: MFCSLRNFLH VNRRFPRHVS PSSSSLSQIQ SPLCFPLSSP SPSQSSFISC PFVWFTSFLC IIRYPFVTKS GTSTYSEDFD RDWIRKVVHN DLWDDPGLEK
101: LFDLTLAPIW VPRVLVELKE DPKLAFKFFK WSMTRNGFKH SVESYCIVAH ILFCARMYYD ANSVLKEMVL SKADCDVFDV LWSTRNVCVP GFGVFDALFS
201: VLIDLGMLEE AIQCFSKMKR FRVFPKTRSC NGLLHRFAKL GKTDDVKRFF KDMIGAGARP TVFTYNIMID CMCKEGDVEA ARGLFEEMKF RGLVPDTVTY
301: NSMIDGFGKV GRLDDTVCFF EEMKDMCCEP DVITYNALIN CFCKFGKLPI GLEFYREMKG NGLKPNVVSY STLVDAFCKE GMMQQAIKFY VDMRRVGLVP
401: NEYTYTSLID ANCKIGNLSD AFRLGNEMLQ VGVEWNVVTY TALIDGLCDA ERMKEAEELF GKMDTAGVIP NLASYNALIH GFVKAKNMDR ALELLNELKG
501: RGIKPDLLLY GTFIWGLCSL EKIEAAKVVM NEMKECGIKA NSLIYTTLMD AYFKSGNPTE GLHLLDEMKE LDIEVTVVTF CVLIDGLCKN KLVSKAVDYF
601: NRISNDFGLQ ANAAIFTAMI DGLCKDNQVE AATTLFEQMV QKGLVPDRTA YTSLMDGNFK QGNVLEALAL RDKMAEIGMK LDLLAYTSLV WGLSHCNQLQ
701: KARSFLEEMI GEGIHPDEVL CISVLKKHYE LGCIDEAVEL QSYLMKHQLL TSDNDNALPN M

Arabidopsis Description

Putative pentatricopeptide repeat-containing protein At2g02150 [Source:UniProtKB/Swiss-Prot;Acc:P0C894]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.