Factsheet for Bra024831.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17611	Canola	cytosol	78.96	97.47
AT2G02150.1	Thale cress	mitochondrion, plastid	82.51	79.37
VIT_01s0010g01780.t01	Wine grape	cytosol	45.22	59.53
KRH42458	Soybean	plastid	54.78	53.4
KRH58559	Soybean	plastid	41.12	51.37
GSMUA_Achr1P06500_001	Banana	cytosol	34.7	49.8
PGSC0003DMT400043863	Potato	endoplasmic reticulum, golgi	50.14	48.23
PGSC0003DMT400043860	Potato	endoplasmic reticulum, golgi	50.14	48.23
Solyc02g021280.1.1	Tomato	endoplasmic reticulum	50.0	48.22
TraesCS7A01G360200.1	Wheat	mitochondrion	37.3	39.0
Os06t0565000-00	Rice	mitochondrion	36.89	38.9
Zm00001d023302_P001	Maize	mitochondrion	36.61	38.29
HORVU7Hr1G087760.14	Barley	cytosol, mitochondrion	36.07	38.21
TraesCS7D01G362900.1	Wheat	mitochondrion	32.1	37.96
TraesCS7B01G267600.1	Wheat	mitochondrion	31.42	36.51
Bra015447.1-P	Field mustard	cytosol	18.72	31.42
KXG22891	Sorghum	mitochondrion	25.0	31.28
Bra013432.1-P	Field mustard	cytosol	19.13	28.28
Bra017434.1-P	Field mustard	cytosol, plastid	21.31	28.01
Bra019985.1-P	Field mustard	cytosol	22.13	26.47
Bra025651.1-P	Field mustard	mitochondrion	26.09	25.64
Bra020001.1-P	Field mustard	mitochondrion	20.77	25.33
Bra015229.1-P	Field mustard	mitochondrion	21.72	25.12
Bra040883.1-P	Field mustard	endoplasmic reticulum	19.4	24.7
Bra035931.1-P	Field mustard	mitochondrion	21.72	24.57
Bra005695.1-P	Field mustard	mitochondrion	24.45	24.16
Bra028204.1-P	Field mustard	cytosol	19.4	23.95
Bra022891.1-P	Field mustard	plastid	19.81	23.62
Bra024554.1-P	Field mustard	cytosol	10.79	23.37
Bra025578.1-P	Field mustard	plastid	19.67	23.11
Bra038853.1-P	Field mustard	mitochondrion	21.17	22.27
Bra024552.1-P	Field mustard	cytosol	7.24	21.03
Bra002000.1-P	Field mustard	cytosol	8.47	20.46
Bra026410.1-P	Field mustard	mitochondrion	21.58	11.98

Protein Annotations

EnsemblPlants:Bra024831.1	EnsemblPlants:Bra024831.1-P	EnsemblPlantsGene:Bra024831	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015
PANTHER:PTHR24015:SF329	PFAM:PF01535	PFAM:PF13041	PFscan:PS51257	PFscan:PS51375	SUPFAM:SSF81901
TIGRFAMs:TIGR00756	UniParc:UPI000253F8DA	UniProt:M4E7S5	MapMan:35.1	:	:

Description

AT2G02150 (E=9e-315) | pentatricopeptide (PPR) repeat-containing protein

Coordinates

chrA06:+:23669323..23671521

Molecular Weight (calculated)

82801.2 Da

IEP (calculated)

5.615

GRAVY (calculated)

0.017

Length

732 amino acids

Sequence
(BLAST)

001: MLCSLRNFIH VNRRFPRRVS PCFPLSSVSC PFVWFTSFLC VIRYPFVTKT HPLDSNRDWI RNVVKNDLWE DPQINNLFDP VHVPRLLLDL KQDPRLALKL
101: FKWSTNRTGS NHTVESYCII AHILFCSRMY HDANSILREM VQLHNCDVFD ALWSTRNVCV PGFGVFDALF SVLIDLDMVE EALQCFSKMK RFRVFPKTRS
201: CNGLLQRFGK LGKREGMKSF FKDMIGAGSK PSVFTYNIMI DCMFKEGDVE AARRFFEEMK LRGLVPDTVT YNSMIDGYGK VGLLDDAVCV FEEMKCMSIE
301: ADVITFNSLI NCFCKNGVLP KGLGFYREMK RSGVKPNVVT YSTLVDGFCK EGMMEQALKF YVDMRRVGLV PNEFTYTSLI DAKCKIGNLT DAFRLGDEML
401: EAGVEWNVVT YTALIDGLCD AERMQEAEEL FGKMVAAGVV PNLASYNALI HGFVKTKNME RALELLNELK GRGIKPDLLL YGTFIWGLCG VEKIEAAKVV
501: MKEMQEDGIK ANTLIYTTLM DAYFKSGNPK EGLHLLEEML QLDIDVTVVT FCVLIDGLCK NKLVSKAIDY FGRMSEEFGL QANAAVYTAM IDGLCKVNQV
601: DAATSLFEEM AQEGLVPDRT AYTSLMDGNL KQGNVLEALA LRDRMDEIGM KLDLLAYTSL VWGLSQCNQL QKARSFLEEM IGEGIVPDEV LCVSVLKKHY
701: ELGCVDEAVE LQGYLMKHQL LTSDKNNALP DM

Best Arabidopsis Sequence Match ( AT2G02150.2 )
(BLAST)

001: MFCSLRNFLH VNRRFPRHVS PSSSSLSQIQ SPLCFPLSSP SPSQSSFISC PFVWFTSFLC IIRYPFVTKS GTSTYSEDFD RDWIRKVVHN DLWDDPGLEK
101: LFDLTLAPIW VPRVLVELKE DPKLAFKFFK WSMTRNGFKH SVESYCIVAH ILFCARMYYD ANSVLKEMVL SKADCDVFDV LWSTRNVCVP GFGVFDALFS
201: VLIDLGMLEE AIQCFSKMKR FRVFPKTRSC NGLLHRFAKL GKTDDVKRFF KDMIGAGARP TVFTYNIMID CMCKEGDVEA ARGLFEEMKF RGLVPDTVTY
301: NSMIDGFGKV GRLDDTVCFF EEMKDMCCEP DVITYNALIN CFCKFGKLPI GLEFYREMKG NGLKPNVVSY STLVDAFCKE GMMQQAIKFY VDMRRVGLVP
401: NEYTYTSLID ANCKIGNLSD AFRLGNEMLQ VGVEWNVVTY TALIDGLCDA ERMKEAEELF GKMDTAGVIP NLASYNALIH GFVKAKNMDR ALELLNELKG
501: RGIKPDLLLY GTFIWGLCSL EKIEAAKVVM NEMKECGIKA NSLIYTTLMD AYFKSGNPTE GLHLLDEMKE LDIEVTVVTF CVLIDGLCKN KLVSKAVDYF
601: NRISNDFGLQ ANAAIFTAMI DGLCKDNQVE AATTLFEQMV QKGLVPDRTA YTSLMDGNFK QGNVLEALAL RDKMAEIGMK LDLLAYTSLV WGLSHCNQLQ
701: KARSFLEEMI GEGIHPDEVL CISVLKKHYE LGCIDEAVEL QSYLMKHQLL TSDNDNALPN M

Arabidopsis Description

Putative pentatricopeptide repeat-containing protein At2g02150 [Source:UniProtKB/Swiss-Prot;Acc:P0C894]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.