Factsheet for Bra026410.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89313	Canola	mitochondrion	98.18	95.71
CDX94295	Canola	cytosol	11.83	88.14
AT4G26680.1	Thale cress	mitochondrion	32.75	82.92
VIT_12s0057g00740.t01	Wine grape	mitochondrion	23.73	59.06
Solyc07g047620.1.1	Tomato	cytosol, mitochondrion	23.2	57.74
PGSC0003DMT400015722	Potato	cytosol	22.97	57.17
KRH44246	Soybean	cytosol	21.61	57.11
GSMUA_Achr1P12600_001	Banana	extracellular	13.27	50.14
HORVU6Hr1G084410.1	Barley	cytosol, mitochondrion	6.9	41.55
HORVU1Hr1G093590.2	Barley	cytosol	7.13	39.5
TraesCS2B01G343000.1	Wheat	cytosol, plastid	14.33	37.65
TraesCS2D01G324100.1	Wheat	plastid	14.1	37.05
Os10t0363500-00	Rice	endoplasmic reticulum	14.1	36.33
HORVU2Hr1G080360.2	Barley	mitochondrion	14.1	36.33
TraesCS2A01G339000.1	Wheat	cytosol	14.56	34.97
Zm00001d030479_P001	Maize	plastid	13.19	34.52
Bra019985.1-P	Field mustard	cytosol	10.99	23.69
Bra015229.1-P	Field mustard	mitochondrion	10.61	22.12
Bra024831.1-P	Field mustard	mitochondrion	11.98	21.58
Bra028204.1-P	Field mustard	cytosol	9.17	20.4
Bra025578.1-P	Field mustard	plastid	9.63	20.39
Bra017434.1-P	Field mustard	cytosol, plastid	8.49	20.11
Bra025651.1-P	Field mustard	mitochondrion	11.22	19.87
Bra005695.1-P	Field mustard	mitochondrion	11.07	19.7
Bra040883.1-P	Field mustard	endoplasmic reticulum	8.42	19.3
Bra020001.1-P	Field mustard	mitochondrion	8.72	19.17
Bra015447.1-P	Field mustard	cytosol	6.22	18.81
Bra013432.1-P	Field mustard	cytosol	6.82	18.18
Bra022891.1-P	Field mustard	plastid	8.34	17.92
Bra035931.1-P	Field mustard	mitochondrion	8.72	17.77
Bra002000.1-P	Field mustard	cytosol	3.34	14.52
Bra038853.1-P	Field mustard	mitochondrion	7.58	14.37
Bra024554.1-P	Field mustard	cytosol	3.34	13.02
Bra024552.1-P	Field mustard	cytosol	1.82	9.52

Protein Annotations

KEGG:00860+6.1.1.17	KEGG:00970+6.1.1.17	Gene3D:1.20.1050.130	Gene3D:1.25.40.10	MapMan:17.2.7	Gene3D:2.40.240.10
Gene3D:3.40.50.620	EnsemblPlantsGene:Bra026410	EnsemblPlants:Bra026410.1	EnsemblPlants:Bra026410.1-P	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004812	GO:GO:0004818	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006412
GO:GO:0006418	GO:GO:0006424	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	GO:GO:0043039	InterPro:Glu-tRNA-synth_arc/euk	InterPro:Glu/Gln-tRNA-synth	InterPro:Glu/Gln-tRNA-synth_Ib_cat-dom	InterPro:Glu/Gln-tRNA-synth_Ib_codon-bd
InterPro:Glutathione-S-Trfase_C_sf	InterPro:IPR002885	InterPro:IPR011990	InterPro:IPR014729	InterPro:IPR020056	UniProt:M4ECA1
HAMAP:MF_02076	PFAM:PF00749	PFAM:PF01535	PFAM:PF03950	PFAM:PF13041	PRINTS:PR00987
ScanProsite:PS00178	PFscan:PS51375	PANTHER:PTHR43097	PANTHER:PTHR43097:SF8	InterPro:Pentatricopeptide_repeat	InterPro:Rbsml_L25/Gln-tRNA_synth_N
InterPro:Ribosomal_L25/Gln-tRNA_synth	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF47616	SUPFAM:SSF50715	SUPFAM:SSF52374	TIGRFAMs:TIGR00463
TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0002545569	InterPro:aa-tRNA-synth_I_CS	SEG:seg	:

Description

AT5G26710 (E=3e-314) | glutamate-tRNA ligase, putative / glutamyl-tRNA synthetase, putatuve / GluRS, putative

Coordinates

chrA01:+:9468691..9475251

Molecular Weight (calculated)

148186.0 Da

IEP (calculated)

9.119

GRAVY (calculated)

-0.403

Length

1319 amino acids

Sequence
(BLAST)

0001: MIRISTGAHR RLCFRFSTFA SHGELDRASA NPTVSKPLLS RNRNTIPIPH RSNPEPKGQD LDFVNVAHSH LIQSDWDKLE KLSNHLDSFR VKNVLLKIQK
0101: DYVLSLEFFT WVKHQSPGSH SLETNAIVLH TLTKNRKFKS AESILREILS TGGIDLPAKL FDALLYSYRE CDSTPRVFDS LFKAFAHLNK FRNATDTFVK
0201: MKEYGFFPNV ESCNAYMSSL IGQGRVDIAL RFYREMRRCK ISPNTYTLNM VISCYCRSGK LDKGVELLQD MERLGFKANN VSYNTLIAGH CEKGLLSSAW
0301: KLKNVMGKSG LQADVVTFNT LIHGFCRDGK LKEASKVFGE MKAVNVAPNT VTYNTLINGY SQQGDHEMAY RFYEDMVFKG IKRDILTYNG LILGLCKQAK
0401: TKKAAHFVKE LDKESLVPNS STFSALIMGQ CVRRNADRGF ELYRSMIRSG CHPNEQTFDV LMSAFCRNED YDGAAQVLRE MVRRSVPLDS RTVHEVCNGL
0501: EHQGKDQLAQ ELVKELEAKK SLQEPLGVEV GAFAVTGGSG GSVTSSASVN TGFGAGGLGA ESTPLGLISF AKKMEEIKLT FPADTPPLSV IVALSLSSSP
0601: VTIDSSSSSA VPSFVFSDGR KLTGTSDLLR HVGRSAKSLP GFYGHDAFEY SQIDEWIDYA PVFSSSGSEF KNACTRVDNY LQSGTFLVGH SLSIADVAVW
0701: SALAGSGLRW ERKSKKYQNL VRRFNSISLE YAEPLKKVAA YTAAKKGSGK PASVAPRSKD QQASDKGKPE VDLPGAEVGK VKLRFAPEPS GYLHIGHAKA
0801: ALLNKYFAER YQGEVIIRFD DTNPAKESNE FVENLVKDIG TLGIKYERVT YTSDYFPDLM SMAEKLMREG KAYVDDTPRE QMHKERKGGI DSKCRNHTVE
0901: ENLNLWREMI AGSKRGLQCC VRGKLDMQDP NKAMRDPVYY RCNPMSHHRI GDKYKIYPTY DFACPFVDSV EGITHALRSS EYHDRNAQYY KVLEDMGLRR
1001: VEIYEFSRLN LVYTLLSKRK LLWFVQQGKV GGWDDPRFPT VQGIVRRGLK IEALIQFILE QGASKNLNLM EWDKLWTINK KIVDPVCPRH TAVVEEGRVL
1101: LTLTDGPDEP FVRLIPKHKK YEGAGEKETT FTKRIWIEGA DASAISVNEE VTLMDWGNAI VKEVTKDEEG RVTALSGLLN LKGSVKTTKL KLTWLPETNE
1201: LVKLTLTDFG YLITKKKLEE NDELVFAKFV NMDTKKETSA LGDSNMRKLE DFPEFVNPDT KKETSALGDS NMRNLQRGDV IQLERKGYYR CDVPFVKSSK
1301: PIVLFSIPDG RQHQPLSAN

Best Arabidopsis Sequence Match ( AT5G26710.1 )
(BLAST)

001: MDGMKLSFPP ESPPLSVIVA LSLSASPVTI DSSAAATTVP SFVFSDGRKL NGATVLLRYV GRSAKKLPDF YGNNAFDSSQ IDEWVDYASV FSSGSEFENA
101: CGRVDKYLES STFLVGHSLS IADVAIWSAL AGTGQRWESL RKSKKYQSLV RWFNSILDEY SEVLNKVLAT YVKKGSGKPV AAPKSKDSQQ AVKGDGQDKG
201: KPEVDLPEAE IGKVKLRFAP EPSGYLHIGH AKAALLNKYF AERYQGEVIV RFDDTNPAKE SNEFVDNLVK DIGTLGIKYE KVTYTSDYFP ELMDMAEKLM
301: REGKAYVDDT PREQMQKERM DGIDSKCRNH SVEENLKLWK EMIAGSERGL QCCVRGKFNM QDPNKAMRDP VYYRCNPMSH HRIGDKYKIY PTYDFACPFV
401: DSLEGITHAL RSSEYHDRNA QYFKVLEDMG LRQVQLYEFS RLNLVFTLLS KRKLLWFVQT GLVDGWDDPR FPTVQGIVRR GLKIEALIQF ILEQGASKNL
501: NLMEWDKLWS INKRIIDPVC PRHTAVVAER RVLFTLTDGP DEPFVRMIPK HKKFEGAGEK ATTFTKSIWL EEADASAISV GEEVTLMDWG NAIVKEITKD
601: EEGRVTALSG VLNLQGSVKT TKLKLTWLPD TNELVNLTLT EFDYLITKKK LEDDDEVADF VNPNTKKETL ALGDSNMRNL KCGDVIQLER KGYFRCDVPF
701: VKSSKPIVLF SIPDGRAAK

Arabidopsis Description

Glutamate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O82462]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.