Factsheet for Os10t0363500-00

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 4
peroxisome 1
mitochondrion 2
cytosol 1
plasma membrane 2
nucleus 1
extracellular 1
endoplasmic reticulum 2
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	cytosol, mitochondrion, nucleus, plasma membrane, plastid
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G343000.1	Wheat	cytosol, plastid	72.27	73.71
TraesCS2D01G324100.1	Wheat	plastid	71.88	73.31
HORVU2Hr1G080360.2	Barley	mitochondrion	72.85	72.85
Zm00001d030479_P001	Maize	plastid	66.41	67.46
TraesCS2A01G339000.1	Wheat	cytosol	71.29	66.48
HORVU6Hr1G084410.1	Barley	cytosol, mitochondrion	27.93	65.3
HORVU1Hr1G093590.2	Barley	cytosol	29.49	63.45
GSMUA_Achr1P12600_001	Banana	extracellular	33.79	49.57
KRH44246	Soybean	cytosol	40.04	41.08
VIT_12s0057g00740.t01	Wine grape	mitochondrion	40.62	39.25
CDX94295	Canola	cytosol	13.28	38.42
PGSC0003DMT400015722	Potato	cytosol	37.5	36.23
Solyc07g047620.1.1	Tomato	cytosol, mitochondrion	36.91	35.66
AT4G26680.1	Thale cress	mitochondrion	35.94	35.32
CDX94298	Canola	mitochondrion	36.13	32.51
Os02t0827900-03	Rice	plastid	26.37	23.28
Os04t0477200-01	Rice	endoplasmic reticulum	19.34	21.76
Os05t0583950-00	Rice	mitochondrion	16.41	20.49
Os10t0484300-01	Rice	mitochondrion	21.48	19.03
Os01t0546700-00	Rice	cytosol	22.07	18.96
Os07t0671200-00	Rice	extracellular	20.12	18.69
Os06t0152500-00	Rice	plastid	23.83	17.58
Os07t0513200-01	Rice	mitochondrion	24.41	16.58
Os06t0565000-00	Rice	mitochondrion	22.46	16.57
Os12t0152600-01	Rice	plastid	22.85	16.34
Os03t0201400-02	Rice	cytosol	24.02	15.45
Os11t0607100-01	Rice	mitochondrion	20.12	15.35
Os09t0417500-01	Rice	mitochondrion	17.19	14.24
Bra026410.1-P	Field mustard	mitochondrion	36.33	14.1
CDX89313	Canola	mitochondrion	36.72	13.89
Os03t0165100-00	Rice	cytosol, mitochondrion	19.14	13.46
Os03t0201200-01	Rice	nucleus	3.71	8.15
Os04t0463300-01	Rice	cytosol	0.59	4.29

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EntrezGene:4348451	ProteinID:AAP53322.2	ProteinID:BAF26354.2	ProteinID:BAT10520.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518
GO:GO:0004519	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009451	GO:GO:0009987	GO:GO:0016787
GO:GO:0043231	GO:GO:0090305	InterPro:IPR002885	InterPro:IPR011990	EnsemblPlantsGene:Os10g0363500	EnsemblPlants:Os10t0363500-00
PFAM:PF01535	PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF1580
InterPro:Pentatricopeptide_repeat	UniProt:Q7G3D2	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0000DB47FF	RefSeq:XP_015612950.1
RefSeq:XP_015612951.1	SEG:seg	:	:	:	:

Description

Pentatricopeptide repeat containing protein. (Os10t0363500-00)

Coordinates

chr10:+:11289218..11290800

Molecular Weight (calculated)

56441.6 Da

IEP (calculated)

9.574

GRAVY (calculated)

0.013

Length

512 amino acids

Sequence
(BLAST)

001: MPPPPPRALP LPHFTLPPLA GEDLLFVTAL RAHLSTAPPP PTTTAASLSR FLPHLTPLRL SHLILAPPPP PRHDDSGHLL LASLLPSPPP PLPFALLLHS
101: LRPRRSSALL ASLLPSIPHH AFPDLLHHVL LTARLTAARP DGGAVPALDV LFSVCARGKK LSLATLAFRA MRAHGLLPRV VSCNVFISAA LGLRRPEIAL
201: SFFREMRRCR ISPNIYTANM VLRAFCDLGR TADAAEVLDK MPEWGVGRTT VSFNTLIAAY CRDGVDAGPA LQLKMKMEQE GLVPDVVTYD TIIHGLCKEG
301: RMGKANQVLS EMRVKGVMPN TVTYNTLIHG YVALGDNAMA GRVHEEMVKN RVELDIVTYN ALILGLCNEG KMKKVEHLLR ELDRAKLEPN ASTFSALIVG
401: WCKMQNSERA LQLLNVMKKS GFHPNYTTYK MVISSFCKNK DLEGAVDVMG DMLGRCIAPD KALLNEFFDG LWKAKKLHLA ENLRSLNNGL KFIPDVYYTG
501: DYRNKDEVIN RC

Best Arabidopsis Sequence Match ( AT4G26680.1 )
(BLAST)

001: MIRISIGVNR RLRYQFSSFA GYSGSENPRL FKTLGAANTP IPHRRNPEPK GQDLDFVNVA HSHLIQSDWD KLNKLSDHLD SFRVKNVLLK IQKDYLLSLE
101: FFNWAKTRNP GSHSLETHAI VLHTLTKNRK FKSAESILRD VLVNGGVDLP AKVFDALLYS YRECDSTPRV FDSLFKTFAH LKKFRNATDT FMQMKDYGFL
201: PTVESCNAYM SSLLGQGRVD IALRFYREMR RCKISPNPYT LNMVMSGYCR SGKLDKGIEL LQDMERLGFR ATDVSYNTLI AGHCEKGLLS SALKLKNMMG
301: KSGLQPNVVT FNTLIHGFCR AMKLQEASKV FGEMKAVNVA PNTVTYNTLI NGYSQQGDHE MAFRFYEDMV CNGIQRDILT YNALIFGLCK QAKTRKAAQF
401: VKELDKENLV PNSSTFSALI MGQCVRKNAD RGFELYKSMI RSGCHPNEQT FNMLVSAFCR NEDFDGASQV LREMVRRSIP LDSRTVHQVC NGLKHQGKDQ
501: LVKKLLQEME GKKFLQESFN N

Arabidopsis Description

Pentatricopeptide repeat-containing protein At4g26680, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ10]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.