Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0201400-02 | Rice | cytosol | 18.88 | 5.53 |
| Os10t0363500-00 | Rice | endoplasmic reticulum | 8.15 | 3.71 |
| PGSC0003DMT400023499 | Potato | plastid | 7.73 | 2.86 |
| Solyc03g007390.2.1 | Tomato | plastid | 7.73 | 2.83 |
| CDY50117 | Canola | plastid | 6.44 | 2.41 |
| CDY42586 | Canola | plastid | 6.01 | 2.26 |
| Bra025578.1-P | Field mustard | plastid | 6.01 | 2.25 |
| AT5G40400.2 | Thale cress | cytosol | 6.44 | 2.2 |
| Os01t0546700-00 | Rice | cytosol | 5.58 | 2.18 |
| VIT_17s0000g03060.t01 | Wine grape | plastid | 6.01 | 2.12 |
| Os10t0484300-01 | Rice | mitochondrion | 5.15 | 2.08 |
| Os06t0152500-00 | Rice | plastid | 5.58 | 1.87 |
| Os07t0513200-01 | Rice | mitochondrion | 6.01 | 1.86 |
| Os12t0152600-01 | Rice | plastid | 5.58 | 1.82 |
| Os02t0827900-03 | Rice | plastid | 4.29 | 1.72 |
| Os07t0671200-00 | Rice | extracellular | 3.86 | 1.63 |
| KRH56553 | Soybean | plastid | 4.29 | 1.6 |
| Os06t0565000-00 | Rice | mitochondrion | 4.72 | 1.59 |
| Os11t0607100-01 | Rice | mitochondrion | 4.29 | 1.49 |
| Os09t0417500-01 | Rice | mitochondrion | 3.0 | 1.13 |
| Os03t0165100-00 | Rice | cytosol, mitochondrion | 2.58 | 0.82 |
| Os05t0583950-00 | Rice | mitochondrion | 0.86 | 0.49 |
| Os04t0477200-01 | Rice | endoplasmic reticulum | 0.86 | 0.44 |
| Os04t0463300-01 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| EMBL:AK069630 | EnsemblPlants:Os03t0201200-01 | EnsemblPlantsGene:Os03g0201200 | EntrezGene:4331973 | ncoils:Coil | PANTHER:PTHR36765 |
| ProteinID:ABF94501.1 | ProteinID:BAF11210.1 | ProteinID:BAS82821.1 | ProteinID:EEE58523.1 | RefSeq:XP_015632700.1 | SEG:seg |
| UniParc:UPI0000DB48BD | UniProt:Q10QC9 | MapMan:35.2 | : | : | : |
Description
Conserved hypothetical protein. (Os03t0201200-01);Hypothetical conserved gene. (Os03t0201200-02)
Coordinates
chr3:+:5302428..5304763
Molecular Weight (calculated)
25080.0 Da
IEP (calculated)
10.256
GRAVY (calculated)
-0.726
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGGGGGRPT ASGANSSSSS DDDGDAAWKA AIESIAAVGF GLPLSNGAAK ATSGGGGEAS HGVEQQPPQE GKAQAPGLKL YQIKVRNMLD NMLEKNLEIV
101: KTTCSNLADP METDGGIKLF KKAPPGIRMD AMDKYHVQLK RPRILPGTDI DEKSKKFRHM LKSVAVDGND ILVSAKKSSE RSLARLEARE AAAKAAAKRE
201: EERVRELKKT RGEKWLPSIA RQMKEEKAWE QRK
101: KTTCSNLADP METDGGIKLF KKAPPGIRMD AMDKYHVQLK RPRILPGTDI DEKSKKFRHM LKSVAVDGND ILVSAKKSSE RSLARLEARE AAAKAAAKRE
201: EERVRELKKT RGEKWLPSIA RQMKEEKAWE QRK
001: MAKRELSGGD SSSEDEDPKW RAAINSIATT TVYGASATKP AATQSHNYGD FRLKPKKLTH GQIKVKNLLN EMVEKTLDFV EDPVNIPEDK PENDCGVRLF
101: KRCATGIVFD HVDEIRGPKK KPNLRPDKGV EGSSKEFKKR VKSIAVDGSD ILTAAVEAAK KASARLDAKE VAAKDKAKKE EERIAELKKV RGEKWLPSIE
201: RAMKKEMKRI KHTAWKSAMS
101: KRCATGIVFD HVDEIRGPKK KPNLRPDKGV EGSSKEFKKR VKSIAVDGSD ILTAAVEAAK KASARLDAKE VAAKDKAKKE EERIAELKKV RGEKWLPSIE
201: RAMKKEMKRI KHTAWKSAMS
Arabidopsis Description
unknown protein; Has 27 Blast hits to 27 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). [Source:TAIR;Acc:AT3G49890]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.