Factsheet for Os05t0583950-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU87837	Sorghum	plastid	76.59	76.59
Zm00001d042911_P001	Maize	mitochondrion, plastid	75.12	75.12
TraesCS3D01G353400.1	Wheat	cytosol	74.39	74.39
TraesCS3A01G359100.1	Wheat	cytosol	73.66	73.66
HORVU3Hr1G086290.19	Barley	plastid	70.98	71.5
GSMUA_Achr6P34120_001	Banana	cytosol	44.39	36.62
PGSC0003DMT400058577	Potato	plastid	45.37	33.16
AT4G11690.1	Thale cress	endoplasmic reticulum	44.88	32.51
KRH50360	Soybean	cytosol, extracellular, plastid	43.66	32.19
KRH51875	Soybean	cytosol	43.66	31.51
Bra040883.1-P	Field mustard	endoplasmic reticulum	43.66	31.13
CDX86757	Canola	endoplasmic reticulum, extracellular	43.66	31.13
VIT_06s0004g04770.t01	Wine grape	plastid	42.68	31.08
KRH02112	Soybean	extracellular, mitochondrion	40.98	31.0
CDY57780	Canola	endoplasmic reticulum	42.93	30.61
KRH51037	Soybean	endoplasmic reticulum, extracellular, plastid	34.15	30.17
Os04t0477200-01	Rice	endoplasmic reticulum	30.0	27.03
Os07t0671200-00	Rice	extracellular	28.54	21.23
Os04t0463300-01	Rice	cytosol	3.41	20.0
Os11t0607100-01	Rice	mitochondrion	31.22	19.08
Os10t0484300-01	Rice	mitochondrion	26.83	19.03
Os06t0152500-00	Rice	plastid	30.98	18.3
Os02t0827900-03	Rice	plastid	24.88	17.59
Os06t0565000-00	Rice	mitochondrion	29.02	17.15
Os09t0417500-01	Rice	mitochondrion	24.88	16.5
Os10t0363500-00	Rice	endoplasmic reticulum	20.49	16.41
Os03t0165100-00	Rice	cytosol, mitochondrion	28.29	15.93
Os12t0152600-01	Rice	plastid	27.07	15.5
Os07t0513200-01	Rice	mitochondrion	28.05	15.25
Os01t0546700-00	Rice	cytosol	21.95	15.1
Os03t0201400-02	Rice	cytosol	25.12	12.94
Os03t0201200-01	Rice	nucleus	0.49	0.86

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EntrezGene:9271831	UniProt:A0A0N7KLB5	ProteinID:BAS95553.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009451	GO:GO:0009719	GO:GO:0009737
GO:GO:0009987	GO:GO:0016787	GO:GO:0043231	GO:GO:0080156	GO:GO:0090305	InterPro:IPR002885
InterPro:IPR011990	EnsemblPlantsGene:Os05g0583950	EnsemblPlants:Os05t0583950-00	PFAM:PF12854	PFAM:PF13041	PFscan:PS51375
PANTHER:PTHR44149	PANTHER:PTHR44149:SF3	InterPro:Pentatricopeptide_repeat	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00018EFE44
RefSeq:XP_015638252.1	:	:	:	:	:

Description

Hypothetical conserved gene. (Os05t0583950-00)

Coordinates

chr5:-:29061003..29062235

Molecular Weight (calculated)

45115.9 Da

IEP (calculated)

8.401

GRAVY (calculated)

-0.105

Length

410 amino acids

Sequence
(BLAST)

001: MWGTTAAAVR RLCAAGDVRS ALAMLARGTK SGDAALDVTA CTALVNGCCK GGDVAEARRV FDEMPLLGLA PNEVTYTALM HGYFTHGQRE KGFALFEEMR
101: RGGVEPNLYT YNCLIGEWCR TGEFERARSL FDEMPVRGIV RNVVSYNTLI AGLCRHGKLW DAAKLLDMMR TEGTRPSIIT FNLLVDGYGK AGKMSNALPF
201: FNQMKAAGFQ PSAVTYNMLI AGFCRARDMT RANRALSDMK ERGLEPTKVT YTILIDSFAR ENHMGKAFEI LAGMEKAGLE VDAHTYGVLV RALCMEGNMK
301: DARKLFQSMG EKGVEPSNVI YDMMIYGYGR EGSSYKALKL IMEMRQKGLI PNSASYGLTI RVLCKDDKCQ EAEALLDDMV RAGLQTSESI CQALLDAKAR
401: LRGSANVSFV

Best Arabidopsis Sequence Match ( AT4G11690.1 )
(BLAST)

001: MAAKSQKTLV LLANLIKFPP LKAFSLLNSP NFHEFQHTHE SISILLRLLL SGNLFSHAQS LLLQVISGKI HSQFFTSSSL LHYLTESETS KTKFRLYEVI
101: INSYVQSQSL NLSISYFNEM VDNGFVPGSN CFNYLLTFVV GSSSFNQWWS FFNENKSKVV LDVYSFGILI KGCCEAGEIE KSFDLLIELT EFGFSPNVVI
201: YTTLIDGCCK KGEIEKAKDL FFEMGKLGLV ANERTYTVLI NGLFKNGVKK QGFEMYEKMQ EDGVFPNLYT YNCVMNQLCK DGRTKDAFQV FDEMRERGVS
301: CNIVTYNTLI GGLCREMKLN EANKVVDQMK SDGINPNLIT YNTLIDGFCG VGKLGKALSL CRDLKSRGLS PSLVTYNILV SGFCRKGDTS GAAKMVKEME
401: ERGIKPSKVT YTILIDTFAR SDNMEKAIQL RLSMEELGLV PDVHTYSVLI HGFCIKGQMN EASRLFKSMV EKNCEPNEVI YNTMILGYCK EGSSYRALKL
501: LKEMEEKELA PNVASYRYMI EVLCKERKSK EAERLVEKMI DSGIDPSTSI LSLISRAKND SHVSSK

Arabidopsis Description

Pentatricopeptide repeat-containing protein At4g11690 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0D6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.