CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, extracellular

Predictor Summary:

nucleus 2
plastid 3
extracellular 2
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	nucleus, plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50360	Soybean	cytosol, extracellular, plastid	80.17	66.91
KRH51875	Soybean	cytosol	81.03	66.2
KRH02112	Soybean	extracellular, mitochondrion	76.29	65.31
VIT_06s0004g04770.t01	Wine grape	plastid	54.96	45.29
PGSC0003DMT400058577	Potato	plastid	49.35	40.82
AT4G11690.1	Thale cress	endoplasmic reticulum	49.57	40.64
CDY57780	Canola	endoplasmic reticulum	48.28	38.96
Bra040883.1-P	Field mustard	endoplasmic reticulum	47.63	38.43
CDX86757	Canola	endoplasmic reticulum, extracellular	46.77	37.74
Zm00001d042911_P001	Maize	mitochondrion, plastid	30.39	34.39
Os05t0583950-00	Rice	mitochondrion	30.17	34.15
OQU87837	Sorghum	plastid	29.53	33.41
TraesCS3D01G353400.1	Wheat	cytosol	27.8	31.46
TraesCS3A01G359100.1	Wheat	cytosol	27.59	31.22
HORVU3Hr1G086290.19	Barley	plastid	27.37	31.2
GSMUA_Achr6P34120_001	Banana	cytosol	31.47	29.38
KRH24548	Soybean	mitochondrion	28.23	21.03
KRH29211	Soybean	cytosol	25.0	19.9
KRH44246	Soybean	cytosol	21.34	19.84
KRH29553	Soybean	mitochondrion	18.32	19.41
KRH17313	Soybean	mitochondrion	19.4	18.87
KRH72966	Soybean	mitochondrion	25.0	18.86
KRH54581	Soybean	mitochondrion	21.12	18.42
KRG99196	Soybean	cytosol	20.26	17.8
KRH33556	Soybean	cytosol	7.97	17.7
KRH56553	Soybean	plastid	23.71	17.57
KRH14574	Soybean	plastid	24.14	17.5
KRH18049	Soybean	plastid	25.43	17.18
KRG89236	Soybean	plastid	28.45	16.97
KRH16451	Soybean	plastid	24.78	16.74
KRH20741	Soybean	cytosol	20.91	16.52
KRH13392	Soybean	cytosol	20.47	16.18
KRH58559	Soybean	plastid	20.04	15.87
KRH34922	Soybean	cytosol	15.52	15.69
KRG90304	Soybean	cytosol	18.75	15.51
KRH45820	Soybean	cytosol, mitochondrion, plastid	23.92	14.96
KRH49758	Soybean	plastid	22.63	14.91
KRH42458	Soybean	plastid	24.14	14.91
KRH40170	Soybean	mitochondrion	22.2	14.86
KRG93154	Soybean	plastid	21.34	10.37

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EMBL:ACUP02004727	EnsemblPlantsGene:GLYMA_07G257600	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0080156	GO:GO:0090305
InterPro:IPR002885	InterPro:IPR011990	UniProt:K7L3V7	EnsemblPlants:KRH51037	ProteinID:KRH51037	ProteinID:KRH51037.1
PFAM:PF01535	PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF362
InterPro:Pentatricopeptide_repeat	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0002957FFB	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:-:43371915..43373996

Molecular Weight (calculated)

51916.2 Da

IEP (calculated)

8.692

GRAVY (calculated)

0.193

Length

464 amino acids

Sequence
(BLAST)

001: MSQSHEALIL IQKMVKVPPP KALLLFNTAT YQGLHHTPHS ISFILNLLLS SDMLLQAQSL ILRLISGRIP SSMISPSSLM LQLIQPPFHL LSNCFDIAWW
101: VFNEFKRKVV MDAYSFGIMI KGRCEAGDLM KGFRLLAMLE EFGFSLNVVI YTTLIYGCCK SGDVRLAKKL FCTMDRLGLV ANHHSCGVLM NGFFKQGLQR
201: EGGIVPNAYA YNCVISEYCN ARMVDKALNV FAEMREKGGL CRGKKFGEAV KIVHQVNKVG LSPNIVTYNI LINGFCDVGK IDTAVRLFNQ LKSNGLSPTL
301: VTYNTLIAGY SKVENLAGAL DLVKEMEERC IPPSKTKLYE KNLRDAFFNG EVWFGFGCLH SVLIHGLCMN GNMKEASKLL KSLGELHLEP NSVIYNTMIH
401: GYCKEGSSYR ALRLFNEMVH SRMVPNVASF CSTIGLLCRD EKWQEAELLL GQFLSLSLIY ILNA

Best Arabidopsis Sequence Match ( AT4G11690.1 )
(BLAST)

001: MAAKSQKTLV LLANLIKFPP LKAFSLLNSP NFHEFQHTHE SISILLRLLL SGNLFSHAQS LLLQVISGKI HSQFFTSSSL LHYLTESETS KTKFRLYEVI
101: INSYVQSQSL NLSISYFNEM VDNGFVPGSN CFNYLLTFVV GSSSFNQWWS FFNENKSKVV LDVYSFGILI KGCCEAGEIE KSFDLLIELT EFGFSPNVVI
201: YTTLIDGCCK KGEIEKAKDL FFEMGKLGLV ANERTYTVLI NGLFKNGVKK QGFEMYEKMQ EDGVFPNLYT YNCVMNQLCK DGRTKDAFQV FDEMRERGVS
301: CNIVTYNTLI GGLCREMKLN EANKVVDQMK SDGINPNLIT YNTLIDGFCG VGKLGKALSL CRDLKSRGLS PSLVTYNILV SGFCRKGDTS GAAKMVKEME
401: ERGIKPSKVT YTILIDTFAR SDNMEKAIQL RLSMEELGLV PDVHTYSVLI HGFCIKGQMN EASRLFKSMV EKNCEPNEVI YNTMILGYCK EGSSYRALKL
501: LKEMEEKELA PNVASYRYMI EVLCKERKSK EAERLVEKMI DSGIDPSTSI LSLISRAKND SHVSSK

Arabidopsis Description

Pentatricopeptide repeat-containing protein At4g11690 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0D6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.