CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72966	Soybean	mitochondrion	90.57	70.24
Os04t0463300-01	Rice	cytosol	7.55	51.43
PGSC0003DMT400034430	Potato	cytosol	48.22	47.92
Solyc11g011410.1.1	Tomato	cytosol	48.01	47.71
VIT_14s0006g00170.t01	Wine grape	mitochondrion	57.23	46.11
Zm00001d003397_P001	Maize	endoplasmic reticulum, extracellular	42.35	41.74
Zm00001d003396_P001	Maize	endoplasmic reticulum, extracellular	42.35	41.74
Bra020001.1-P	Field mustard	mitochondrion	51.99	41.33
CDX93490	Canola	mitochondrion	51.99	41.33
AT1G09680.1	Thale cress	mitochondrion	52.2	41.02
GSMUA_Achr6P30640_001	Banana	mitochondrion, plastid	51.78	40.83
CDX94959	Canola	mitochondrion	50.52	39.64
EES10956	Sorghum	mitochondrion	43.61	33.88
TraesCS2A01G336700.1	Wheat	cytosol	43.19	33.83
TraesCS2B01G345200.1	Wheat	mitochondrion	42.98	33.66
TraesCS2D01G326200.1	Wheat	mitochondrion	42.98	33.66
HORVU2Hr1G080860.1	Barley	plastid	42.56	32.12
KRH33556	Soybean	cytosol	11.11	25.36
KRH29211	Soybean	cytosol	30.61	25.04
KRH44246	Soybean	cytosol	24.53	23.45
KRH20741	Soybean	cytosol	27.67	22.49
KRH24548	Soybean	mitochondrion	29.35	22.47
KRH13392	Soybean	cytosol	27.04	21.98
KRH50360	Soybean	cytosol, extracellular, plastid	24.95	21.4
KRH51875	Soybean	cytosol	24.95	20.95
KRH02112	Soybean	extracellular, mitochondrion	23.48	20.66
KRG99196	Soybean	cytosol	22.85	20.64
KRH14574	Soybean	plastid	27.04	20.16
KRH51037	Soybean	endoplasmic reticulum, extracellular, plastid	18.87	19.4
KRH29553	Soybean	mitochondrion	17.61	19.18
KRH34922	Soybean	cytosol	18.03	18.74
KRH16451	Soybean	plastid	26.62	18.49
KRH18049	Soybean	plastid	26.21	18.2
KRH45820	Soybean	cytosol, mitochondrion, plastid	28.3	18.19
KRG90304	Soybean	cytosol	21.17	18.0
KRH56553	Soybean	plastid	22.64	17.25
KRH54581	Soybean	mitochondrion	19.08	17.11
KRG89236	Soybean	plastid	27.67	16.97
KRH58559	Soybean	plastid	20.34	16.55
KRH40170	Soybean	mitochondrion	23.9	16.45
KRH49758	Soybean	plastid	24.11	16.34
KRH42458	Soybean	plastid	25.37	16.11
KRG93154	Soybean	plastid	24.53	12.25

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	UniProt:A0A0R0GG01	EMBL:ACUP02009081	EnsemblPlantsGene:GLYMA_14G212600	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009451	GO:GO:0009987	GO:GO:0016787	GO:GO:0043231	GO:GO:0090305
InterPro:IPR002885	InterPro:IPR011990	EnsemblPlants:KRH17313	ProteinID:KRH17313	ProteinID:KRH17313.1	PFAM:PF01535
PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF923	InterPro:Pentatricopeptide_repeat
TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0006EDC5BE	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr14:+:47779759..47781371

Molecular Weight (calculated)

53206.9 Da

IEP (calculated)

7.834

GRAVY (calculated)

-0.121

Length

477 amino acids

Sequence
(BLAST)

001: MAMAIIMKLK PKLWKTKTSP LLSCTHLLQC SSWSHFPYKD HNLLCEIFEA INDSENEKDY YSKNPRLKQI LPYLKPRHFP VPVQGCENLL RRVVRLRPVE
101: LERSWAFYLE VLDSGYPPNF FFFNVLMHGF CKVGGVGSAR LVFDEIPKRG LRPTVVSFNT LISGCCKAGA VEEGFRLKGV MESERVCPDV FTFSALINGL
201: CKEGRLDEGS LLFDEMCGKG LVPNGVTFTV LIDGQCKGGK VDLALKNFQM MLAQGVRPDL VTYNALINGL CKVGDLKEAR RLVNEMSASG LRPDRITFTT
301: LIDGCCKYGD MESALEIKRR MVEEGIELDD VAFTVLISGL CRDGRVHDAE RMLRDMLSAG FKPDDPTYTM VVDCFCKKGN MQSDGHVPGV VTYNALMNGL
401: CKQGQVKNAK MLLDAMLNVG VAPNDITYNI LLEGHSKHGS SVDVDIFNSE KGLVKDYASY TALVNESSKT SKDHLKR

Best Arabidopsis Sequence Match ( AT1G09680.1 )
(BLAST)

001: MFRIEILRCT LSQSHPQRFS RASFLLSTWY SQESVSAADN DDDPVLVKLS VAIRDSYKDP PLEFSSFTDC PSIRKVLPSL SVHHVVDLIN HNPLSLPQRS
101: IFAFFKFISS QPGFRFTVET YFVLARFLAV HEMFTEAQSL IELVVSRKGK NSASSVFISL VEMRVTPMCG FLVDALMITY TDLGFIPDAI QCFRLSRKHR
201: FDVPIRGCGN LLDRMMKLNP TGTIWGFYME ILDAGFPLNV YVFNILMNKF CKEGNISDAQ KVFDEITKRS LQPTVVSFNT LINGYCKVGN LDEGFRLKHQ
301: MEKSRTRPDV FTYSALINAL CKENKMDGAH GLFDEMCKRG LIPNDVIFTT LIHGHSRNGE IDLMKESYQK MLSKGLQPDI VLYNTLVNGF CKNGDLVAAR
401: NIVDGMIRRG LRPDKITYTT LIDGFCRGGD VETALEIRKE MDQNGIELDR VGFSALVCGM CKEGRVIDAE RALREMLRAG IKPDDVTYTM MMDAFCKKGD
501: AQTGFKLLKE MQSDGHVPSV VTYNVLLNGL CKLGQMKNAD MLLDAMLNIG VVPDDITYNT LLEGHHRHAN SSKRYIQKPE IGIVADLASY KSIVNELDRA
601: SKDHRNR

Arabidopsis Description

Putative pentatricopeptide repeat-containing protein At1g09680 [Source:UniProtKB/Swiss-Prot;Acc:O04491]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.