Factsheet for HORVU2Hr1G080860.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G336700.1	Wheat	cytosol	90.98	94.42
TraesCS2B01G345200.1	Wheat	mitochondrion	90.66	94.09
TraesCS2D01G326200.1	Wheat	mitochondrion	90.35	93.76
Os04t0463300-01	Rice	cytosol	8.86	80.0
EES10956	Sorghum	mitochondrion	69.94	71.99
Zm00001d003397_P001	Maize	endoplasmic reticulum, extracellular	55.06	71.9
Zm00001d003396_P001	Maize	endoplasmic reticulum, extracellular	55.06	71.9
GSMUA_Achr6P30640_001	Banana	mitochondrion, plastid	47.78	49.92
PGSC0003DMT400034430	Potato	cytosol	34.18	45.0
Solyc11g011410.1.1	Tomato	cytosol	33.7	44.38
VIT_14s0006g00170.t01	Wine grape	mitochondrion	41.46	44.26
KRH72966	Soybean	mitochondrion	42.72	43.9
KRH17313	Soybean	mitochondrion	32.12	42.56
Bra020001.1-P	Field mustard	mitochondrion	40.19	42.33
CDX93490	Canola	mitochondrion	40.19	42.33
CDX94959	Canola	mitochondrion	39.72	41.28
AT1G09680.1	Thale cress	mitochondrion	38.29	39.87
HORVU6Hr1G084410.1	Barley	cytosol, mitochondrion	11.39	32.88
HORVU1Hr1G093590.2	Barley	cytosol	11.55	30.67
HORVU2Hr1G019920.1	Barley	cytosol	16.77	28.34
HORVU2Hr1G082620.1	Barley	plastid	22.63	28.26
HORVU2Hr1G080360.2	Barley	mitochondrion	21.52	26.56
HORVU3Hr1G086290.19	Barley	plastid	17.09	26.54
HORVU1Hr1G042440.2	Barley	mitochondrion	23.89	26.35
HORVU6Hr1G087430.7	Barley	cytosol	24.53	25.12
HORVU2Hr1G019880.2	Barley	cytosol	13.29	23.33
HORVU7Hr1G028150.1	Barley	mitochondrion	18.35	22.97
HORVU7Hr1G087760.14	Barley	cytosol, mitochondrion	24.53	22.43
HORVU2Hr1G046710.2	Barley	cytosol, plastid	27.22	22.22
HORVU5Hr1G042300.1	Barley	plastid	24.53	21.74
HORVU4Hr1G074200.9	Barley	mitochondrion	23.42	21.7
HORVU5Hr1G009510.3	Barley	cytosol	20.25	21.69
HORVU7Hr1G023200.23	Barley	cytosol	22.63	20.61
HORVU5Hr1G066340.2	Barley	mitochondrion	18.04	18.39
HORVU0Hr1G013090.3	Barley	cytosol, plastid	16.3	17.79
HORVU4Hr1G070310.1	Barley	plastid	22.78	17.22

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	UniProt:A0A287ILZ9	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	EnsemblPlantsGene:HORVU2Hr1G080860
EnsemblPlants:HORVU2Hr1G080860.1	InterPro:IPR002885	InterPro:IPR011990	PFAM:PF01535	PFAM:PF12854	PFAM:PF13041
PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF923	InterPro:Pentatricopeptide_repeat	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf
UniParc:UPI000B474553	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:586098256..586100442

Molecular Weight (calculated)

68771.4 Da

IEP (calculated)

8.911

GRAVY (calculated)

-0.010

Length

632 amino acids

Sequence
(BLAST)

001: GLGPLASCHG SSFSPTPTPP LANMRRALRH RPRLQPPTET PPAPSAPLPW YAAPRAPPPH SPPTTEVDPL IVAASEVALT LPVHPAALPA TAPAPLLRLL
101: PAFTSAHFLS LLRSNPLSLP PLPLLSLFRL LLLASPPGLF RHTPSSFLSM SHYLLLHRLP DLARPLLRLL VSRLGRSSPP RLLPLLVPAA SPEDPAPLVS
201: ELAAAYADEG LLADASSLVL LALRGGTRLP APVCFGLMSR LPTTPEAYTF YLQLLDAGMA PEIRQFNVLM RDFVRFGDLA SARKVFDEMR TRSVQPTVVS
301: FNTLITGMCR ARDLDGVDGL YKGMIQMGVT PDVYTYSALI KGLSSSGRME DATKMFDEMR ERGVKPNAIV FTTLIDAHCK DGDVKAGMDL YQDMRARGVM
401: PDLVAYNALV NGLCRARNFK AAECIVEEMR SIGLKPDKVT YTTLIDGCCK DGKLDTAMDI KQKMADEEVA LDEVTYTALI SGLSKAGRPV NAQRVLVEMM
501: KAGLEPDNTT YTMVIDAFCR KGDVKTGFKL LKEMQNKGRK PGVVTYNVII SGLCKLGQLK NADMLLHAML NIGVTPDDIT YNILLDGQCK HGKVTDSEEL
601: KSAKGMVPDF GVYTSLISEL VKKKPAKSYH DR

Best Arabidopsis Sequence Match ( AT1G09680.1 )
(BLAST)

001: MFRIEILRCT LSQSHPQRFS RASFLLSTWY SQESVSAADN DDDPVLVKLS VAIRDSYKDP PLEFSSFTDC PSIRKVLPSL SVHHVVDLIN HNPLSLPQRS
101: IFAFFKFISS QPGFRFTVET YFVLARFLAV HEMFTEAQSL IELVVSRKGK NSASSVFISL VEMRVTPMCG FLVDALMITY TDLGFIPDAI QCFRLSRKHR
201: FDVPIRGCGN LLDRMMKLNP TGTIWGFYME ILDAGFPLNV YVFNILMNKF CKEGNISDAQ KVFDEITKRS LQPTVVSFNT LINGYCKVGN LDEGFRLKHQ
301: MEKSRTRPDV FTYSALINAL CKENKMDGAH GLFDEMCKRG LIPNDVIFTT LIHGHSRNGE IDLMKESYQK MLSKGLQPDI VLYNTLVNGF CKNGDLVAAR
401: NIVDGMIRRG LRPDKITYTT LIDGFCRGGD VETALEIRKE MDQNGIELDR VGFSALVCGM CKEGRVIDAE RALREMLRAG IKPDDVTYTM MMDAFCKKGD
501: AQTGFKLLKE MQSDGHVPSV VTYNVLLNGL CKLGQMKNAD MLLDAMLNIG VVPDDITYNT LLEGHHRHAN SSKRYIQKPE IGIVADLASY KSIVNELDRA
601: SKDHRNR

Arabidopsis Description

Putative pentatricopeptide repeat-containing protein At1g09680 [Source:UniProtKB/Swiss-Prot;Acc:O04491]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.