Factsheet for HORVU4Hr1G074200.9

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G280500.1	Wheat	plastid	83.72	97.27
TraesCS4D01G279000.1	Wheat	mitochondrion	92.23	96.92
TraesCS4A01G023000.1	Wheat	plastid	83.28	96.76
Zm00001d027800_P001	Maize	mitochondrion	76.1	79.97
KXG40115	Sorghum	cytosol	50.15	79.17
Os03t0165100-00	Rice	cytosol, mitochondrion	78.3	73.35
GSMUA_AchrUn_...	Banana	mitochondrion	45.89	54.43
PGSC0003DMT400024895	Potato	cytosol	35.63	53.06
VIT_06s0009g03510.t01	Wine grape	mitochondrion	45.01	50.41
KRH14574	Soybean	plastid	46.04	49.06
PGSC0003DMT400003372	Potato	mitochondrion	45.6	42.6
Bra005695.1-P	Field mustard	mitochondrion	42.96	39.54
CDY11211	Canola	mitochondrion	42.96	39.54
AT5G01110.2	Thale cress	cytosol, plastid	43.11	38.84
CDX80791	Canola	mitochondrion	33.28	37.77
HORVU2Hr1G019920.1	Barley	cytosol	16.72	30.48
HORVU2Hr1G082620.1	Barley	plastid	21.55	29.05
HORVU1Hr1G042440.2	Barley	mitochondrion	23.02	27.4
HORVU3Hr1G086290.19	Barley	plastid	15.84	26.54
HORVU7Hr1G023200.23	Barley	cytosol	26.54	26.08
HORVU7Hr1G087760.14	Barley	cytosol, mitochondrion	25.81	25.47
HORVU6Hr1G084410.1	Barley	cytosol, mitochondrion	8.06	25.11
HORVU0Hr1G013090.3	Barley	cytosol, plastid	21.11	24.87
HORVU5Hr1G066340.2	Barley	mitochondrion	22.58	24.84
HORVU2Hr1G019880.2	Barley	cytosol	13.05	24.72
HORVU2Hr1G046710.2	Barley	cytosol, plastid	28.01	24.68
HORVU5Hr1G042300.1	Barley	plastid	25.37	24.26
HORVU1Hr1G093590.2	Barley	cytosol	8.21	23.53
HORVU2Hr1G080860.1	Barley	plastid	21.7	23.42
HORVU4Hr1G070310.1	Barley	plastid	26.25	21.41
HORVU6Hr1G087430.7	Barley	cytosol	19.35	21.39
HORVU5Hr1G009510.3	Barley	cytosol	18.48	21.36
HORVU7Hr1G028150.1	Barley	mitochondrion	14.52	19.6
HORVU2Hr1G080360.2	Barley	mitochondrion	13.78	18.36

Protein Annotations

EnsemblPlants:HORVU4Hr1G074200.9	EnsemblPlantsGene:HORVU4Hr1G074200	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015	PANTHER:PTHR24015:SF648
PFAM:PF01535	PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	SEG:seg	TIGRFAMs:TIGR00756
UniParc:UPI000B47002A	UniProt:A0A287PN94	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:593329641..593333842

Molecular Weight (calculated)

76189.5 Da

IEP (calculated)

8.504

GRAVY (calculated)

-0.162

Length

682 amino acids

Sequence
(BLAST)

001: GRWVYWFRIL SLKAAAPTPS LQRTRVHHRS PSAMAIPRRL PCLPTVAVST RRSTASLAVS HGGTGARPST AVLAAAATAA AAAGRASECQ SLLLRMSRRR
101: GASRVDIVSS LLASSPTPQP QVFDLLIRTY TQSRKPREAF EAFRLLLDRR VPIPAAASNA LLAALSRAGW PHLTADAYRL VLSSGSEVNT YTLNIMVHSC
201: CKALQFDKVD TVISEMEKRC VFPDVVTHNV MIDARFRAGD VEAAMAVVDS MVSQGIKPGI LTYNAVLKGL CRNGRWDKAR EVFRAMDEYG VAPDVRSFNM
301: LIGGFCRVKE AGEAMKFYKE MRRRGVTPDI VSFSCLIGLF ARRGEMDRGA AYLREMREFG LMPDGVIYTM IIGGYCRAGS MLEALRVRDE MVGHGCLPDV
401: VTYNTLLNGL CKGRRLSDAE ELLTEMRERG VPPDLCTFTT LIHGYCREGN IEKALQLFET MLHERLTPDI VTYNTLIDGM CRQGDLGKAN ELWDDMHSRE
501: IFPNHITYSI LIDSHCEKGQ VDDAFGFLDE MINKGIVPNI MTYNSIIKGY CRSGNVLKGQ QFLQKMRDAK VLPDLITYNT LIHGYVKEEK MHEAFNLLNM
601: MENEKVQADT VTYNMIINGF SVHGNMQEAD WVYKKMGARG IEPDRYTYMS MINGHVAAGN SKESFQLHDE MLQKGFAPDD KF

Best Arabidopsis Sequence Match ( AT1G05670.2 )
(BLAST)

001: MKKPFTGLLM KRGTLSSFRN FIQLFSLQSR GLSFSTLTDT RPFPDYSPKK ASVRDTEFVH QITNVIKLRR AEPLRRSLKP YECKFKTDHL IWVLMKIKCD
101: YRLVLDFFDW ARSRRDSNLE SLCIVIHLAV ASKDLKVAQS LISSFWERPK LNVTDSFVQF FDLLVYTYKD WGSDPRVFDV FFQVLVDFGL LREARRVFEK
201: MLNYGLVLSV DSCNVYLTRL SKDCYKTATA IIVFREFPEV GVCWNVASYN IVIHFVCQLG RIKEAHHLLL LMELKGYTPD VISYSTVVNG YCRFGELDKV
301: WKLIEVMKRK GLKPNSYIYG SIIGLLCRIC KLAEAEEAFS EMIRQGILPD TVVYTTLIDG FCKRGDIRAA SKFFYEMHSR DITPDVLTYT AIISGFCQIG
401: DMVEAGKLFH EMFCKGLEPD SVTFTELING YCKAGHMKDA FRVHNHMIQA GCSPNVVTYT TLIDGLCKEG DLDSANELLH EMWKIGLQPN IFTYNSIVNG
501: LCKSGNIEEA VKLVGEFEAA GLNADTVTYT TLMDAYCKSG EMDKAQEILK EMLGKGLQPT IVTFNVLMNG FCLHGMLEDG EKLLNWMLAK GIAPNATTFN
601: SLVKQYCIRN NLKAATAIYK DMCSRGVGPD GKTYENLVKG HCKARNMKEA WFLFQEMKGK GFSVSVSTYS VLIKGFLKRK KFLEAREVFD QMRREGLAAD
701: KEIFDFFSDT KYKGKRPDTI VDPIDEIIEN YLVDEQLRGA N

Arabidopsis Description

Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A068FPW3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.