Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G203500.2 | Wheat | cytosol, mitochondrion | 89.15 | 91.8 |
| TraesCS3A01G201500.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 89.15 | 91.8 |
| TraesCS3B01G225400.1 | Wheat | cytosol, mitochondrion | 88.81 | 91.45 |
| EES00885 | Sorghum | cytosol, mitochondrion | 74.41 | 76.61 |
| Zm00001d009391_P001 | Maize | cytosol | 73.9 | 76.09 |
| Os01t0546700-00 | Rice | cytosol | 76.1 | 75.34 |
| GSMUA_Achr5P09880_001 | Banana | mitochondrion | 45.08 | 39.82 |
| HORVU6Hr1G084410.1 | Barley | cytosol, mitochondrion | 10.0 | 26.94 |
| HORVU1Hr1G042440.2 | Barley | mitochondrion | 24.07 | 24.78 |
| HORVU2Hr1G082620.1 | Barley | plastid | 20.51 | 23.91 |
| HORVU1Hr1G093590.2 | Barley | cytosol | 9.15 | 22.69 |
| HORVU2Hr1G080360.2 | Barley | mitochondrion | 19.15 | 22.07 |
| HORVU2Hr1G019920.1 | Barley | cytosol | 13.73 | 21.66 |
| HORVU6Hr1G087430.7 | Barley | cytosol | 22.37 | 21.39 |
| HORVU7Hr1G028150.1 | Barley | mitochondrion | 17.63 | 20.59 |
| HORVU3Hr1G086290.19 | Barley | plastid | 14.07 | 20.39 |
| HORVU2Hr1G080860.1 | Barley | plastid | 21.69 | 20.25 |
| HORVU7Hr1G023200.23 | Barley | cytosol | 22.88 | 19.45 |
| HORVU5Hr1G042300.1 | Barley | plastid | 23.05 | 19.07 |
| HORVU7Hr1G087760.14 | Barley | cytosol, mitochondrion | 22.2 | 18.96 |
| HORVU4Hr1G074200.9 | Barley | mitochondrion | 21.36 | 18.48 |
| HORVU5Hr1G066340.2 | Barley | mitochondrion | 19.15 | 18.23 |
| HORVU0Hr1G013090.3 | Barley | cytosol, plastid | 17.63 | 17.96 |
| HORVU2Hr1G046710.2 | Barley | cytosol, plastid | 23.56 | 17.96 |
| HORVU4Hr1G070310.1 | Barley | plastid | 22.88 | 16.15 |
| HORVU2Hr1G019880.2 | Barley | cytosol | 9.49 | 15.56 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G009510.3 | EnsemblPlantsGene:HORVU5Hr1G009510 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002885 | InterPro:IPR011990 | InterPro:PPR_long | InterPro:Pentatricopeptide_repeat | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR24015 |
| PANTHER:PTHR24015:SF657 | PFAM:PF01535 | PFAM:PF13041 | PFAM:PF17177 | PFscan:PS51375 | SEG:seg |
| TIGRFAMs:TIGR00756 | UniParc:UPI000B466035 | UniProt:A0A287QBG9 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr5H:+:22882552..22884411
Molecular Weight (calculated)
64777.8 Da
IEP (calculated)
6.952
GRAVY (calculated)
0.055
Length
590 amino acids
Sequence
(BLAST)
(BLAST)
001: NAVSRIPSST LTSLLPRALN PHAAVVDLIT THLTADAEPT KALDLSGLLP YLGQDELTAV VLHAGHSHPL PTLRFLIAVP PPLQPSPPHL AFLAHSLATA
101: RSFSHALDAL SHLLRLHPTH DALPTLLLSY QTAPHPSLPG LLVKALLRRA RLRHAFHAAL RAAASGFPPD TVAFNALLAA LSRADRFDDL WAARAAMARA
201: GVRPNAHTFN ILVAALCRGE DAERAQGFLE ELEEQGFEPD VVTYNTLLVG YCRRGRLQDA LHLFDVMPPR GVEPDLVSHT VLMDGLCKAG RLGDARRLFD
301: RMVHSGVSPD AVAYSVLIAG YCNEWRVKEA RLLLMEMVGN GLSSQGFTLK SVIESHVKIG KLLTCLNMVS PLRKYGVTIP LESYNCLIRA LCEDMRPHAA
401: RGLFQWMIED GQGPTLEMYN MVVDCFCRCG SVDEALDIKV EMSSGGVKPD FDTYHMLVTC LCRLGRSFNG KSVMEEMIES GLQPNEAICA ALVRGFCKEG
501: SLDKAELILK AFVLDLQVRC NKSYNTLMRA YCMTRSTTES LELQNRMLEL GFVPNSETCR SIVYGLSRSD YSSDDGMRLS PCMMNENICG
101: RSFSHALDAL SHLLRLHPTH DALPTLLLSY QTAPHPSLPG LLVKALLRRA RLRHAFHAAL RAAASGFPPD TVAFNALLAA LSRADRFDDL WAARAAMARA
201: GVRPNAHTFN ILVAALCRGE DAERAQGFLE ELEEQGFEPD VVTYNTLLVG YCRRGRLQDA LHLFDVMPPR GVEPDLVSHT VLMDGLCKAG RLGDARRLFD
301: RMVHSGVSPD AVAYSVLIAG YCNEWRVKEA RLLLMEMVGN GLSSQGFTLK SVIESHVKIG KLLTCLNMVS PLRKYGVTIP LESYNCLIRA LCEDMRPHAA
401: RGLFQWMIED GQGPTLEMYN MVVDCFCRCG SVDEALDIKV EMSSGGVKPD FDTYHMLVTC LCRLGRSFNG KSVMEEMIES GLQPNEAICA ALVRGFCKEG
501: SLDKAELILK AFVLDLQVRC NKSYNTLMRA YCMTRSTTES LELQNRMLEL GFVPNSETCR SIVYGLSRSD YSSDDGMRLS PCMMNENICG
001: MKNLVSNLRF FSSYSSSIVP RCSNIPKPIL NPLYNLLPQS QNPSKIVDVI CSTLNHSDYS VLLPNLRDEV KSLIPHLGYP EISRVLLRFQ SDASRAITFF
101: KWVKFDLGKR PNVGNYCLLL HILVSSKKFP LAMQFLCELI ELTSKKEEVD VFRVLVSATD ECNWDPVVFD MLVKGYLKLG LVEEGFRVFR EVLDSGFSVS
201: VVTCNHLLNG LLKLDLMEDC WQVYSVMCRV GIHPNTYTFN ILTNVFCNDS NFREVDDFLE KMEEEGFEPD LVTYNTLVSS YCRRGRLKEA FYLYKIMYRR
301: RVVPDLVTYT SLIKGLCKDG RVREAHQTFH RMVDRGIKPD CMSYNTLIYA YCKEGMMQQS KKLLHEMLGN SVVPDRFTCK VIVEGFVREG RLLSAVNFVV
401: ELRRLKVDIP FEVCDFLIVS LCQEGKPFAA KHLLDRIIEE EGHEAKPETY NNLIESLSRC DAIEEALVLK GKLKNQNQVL DAKTYRALIG CLCRIGRNRE
501: AESLMAEMFD SEVKPDSFIC GALVYGYCKE LDFDKAERLL SLFAMEFRIF DPESYNSLVK AVCETGCGYK KALELQERMQ RLGFVPNRLT CKYLIQVLEQ
601: PSLPNHLPEN
101: KWVKFDLGKR PNVGNYCLLL HILVSSKKFP LAMQFLCELI ELTSKKEEVD VFRVLVSATD ECNWDPVVFD MLVKGYLKLG LVEEGFRVFR EVLDSGFSVS
201: VVTCNHLLNG LLKLDLMEDC WQVYSVMCRV GIHPNTYTFN ILTNVFCNDS NFREVDDFLE KMEEEGFEPD LVTYNTLVSS YCRRGRLKEA FYLYKIMYRR
301: RVVPDLVTYT SLIKGLCKDG RVREAHQTFH RMVDRGIKPD CMSYNTLIYA YCKEGMMQQS KKLLHEMLGN SVVPDRFTCK VIVEGFVREG RLLSAVNFVV
401: ELRRLKVDIP FEVCDFLIVS LCQEGKPFAA KHLLDRIIEE EGHEAKPETY NNLIESLSRC DAIEEALVLK GKLKNQNQVL DAKTYRALIG CLCRIGRNRE
501: AESLMAEMFD SEVKPDSFIC GALVYGYCKE LDFDKAERLL SLFAMEFRIF DPESYNSLVK AVCETGCGYK KALELQERMQ RLGFVPNRLT CKYLIQVLEQ
601: PSLPNHLPEN
Arabidopsis Description
Pentatricopeptide repeat (PPR) superfamily protein [Source:TAIR;Acc:AT5G40400]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.