Factsheet for HORVU2Hr1G019920.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G019880.2	Barley	cytosol	72.46	75.28
TraesCS2A01G114800.1	Wheat	plastid	95.19	66.17
TraesCS2B01G133900.1	Wheat	plastid	94.39	65.61
EER99880	Sorghum	cytosol	83.42	65.27
TraesCS2D01G115600.1	Wheat	cytosol, plastid	95.45	61.03
Os07t0671200-00	Rice	extracellular	81.02	54.99
Zm00001d007125_P001	Maize	endoplasmic reticulum, plastid	78.34	54.56
Zm00001d007129_P001	Maize	endoplasmic reticulum, plastid	76.47	53.26
Zm00001d007127_P001	Maize	endoplasmic reticulum, plastid	73.53	52.78
GSMUA_Achr11P...	Banana	cytosol	59.36	45.21
KRH33556	Soybean	cytosol	22.99	41.15
PGSC0003DMT400027103	Potato	cytosol	42.51	38.88
Solyc10g084080.1.1	Tomato	cytosol, extracellular	44.92	32.75
VIT_08s0040g01530.t01	Wine grape	cytosol	52.14	31.45
CDX79463	Canola	plastid	46.79	28.36
CDX84733	Canola	plastid	45.99	28.01
Bra022891.1-P	Field mustard	plastid	45.99	28.01
KRG90304	Soybean	cytosol	40.91	27.27
AT2G32630.1	Thale cress	mitochondrion, plastid	44.65	26.76
HORVU3Hr1G086290.19	Barley	plastid	27.27	25.06
HORVU6Hr1G084410.1	Barley	cytosol, mitochondrion	12.83	21.92
HORVU2Hr1G082620.1	Barley	plastid	27.81	20.55
HORVU1Hr1G042440.2	Barley	mitochondrion	30.21	19.72
HORVU1Hr1G093590.2	Barley	cytosol	12.03	18.91
HORVU0Hr1G013090.3	Barley	cytosol, plastid	29.14	18.83
KRG93154	Soybean	plastid	47.33	18.53
PGSC0003DMT400027113	Potato	cytosol, plastid	50.0	18.51
HORVU7Hr1G023200.23	Barley	cytosol	33.42	18.01
HORVU5Hr1G066340.2	Barley	mitochondrion	29.14	17.58
HORVU7Hr1G087760.14	Barley	cytosol, mitochondrion	31.82	17.22
HORVU2Hr1G080860.1	Barley	plastid	28.34	16.77
HORVU4Hr1G074200.9	Barley	mitochondrion	30.48	16.72
HORVU7Hr1G028150.1	Barley	mitochondrion	21.93	16.24
PGSC0003DMT400027098	Potato	cytosol	25.94	15.7
HORVU5Hr1G042300.1	Barley	plastid	28.88	15.15
HORVU5Hr1G009510.3	Barley	cytosol	21.66	13.73
Solyc10g084090.1.1	Tomato	cytosol	48.93	13.69
HORVU2Hr1G046710.2	Barley	cytosol, plastid	28.07	13.57
HORVU4Hr1G070310.1	Barley	plastid	30.21	13.52
HORVU6Hr1G087430.7	Barley	cytosol	21.93	13.29
AT2G28050.1	Thale cress	cytosol, plastid	16.04	12.99
PGSC0003DMT400040701	Potato	mitochondrion	18.98	12.91
Solyc06g010270.1.1	Tomato	mitochondrion	15.51	12.53
HORVU2Hr1G080360.2	Barley	mitochondrion	17.11	12.5

Protein Annotations

EnsemblPlants:HORVU2Hr1G019920.1	EnsemblPlantsGene:HORVU2Hr1G019920	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015	PANTHER:PTHR24015:SF418
PFAM:PF01535	PFAM:PF13041	PFscan:PS51375	SUPFAM:SSF81901	TIGRFAMs:TIGR00756	UniParc:UPI000B47BC68
UniProt:A0A287H9T6	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:52533483..52534903

Molecular Weight (calculated)

41564.0 Da

IEP (calculated)

5.726

GRAVY (calculated)

-0.241

Length

374 amino acids

Sequence
(BLAST)

001: MXNACCYNPL LDTYTRQKND ARVAEVLKEM ESGGVEPTVG TYTILVDGLS TAGDISKVES VFDEIKRKNV AGDVYFYSAV INAYCRAGNV RRASEVFDEC
101: VGNGIEPNER TYGALINGFC KIGQIEAAEM LLTDMQLRGV GHNQIIFNTM IDGYCRHGMV DKALEIKAVM ERMGIQLDVY TYNTLACGLC RVNRMEDAKK
201: LLHIMTENGV ESNYVSYTTL ISIHSKEGDM VEARRLFRDM EGKGSRPSVV TYNVMIDGYI KSGSIREAER FKKEMEKKGL VPDVYTYAAL VHGHCVNGKV
301: DVALRLFEEM KQRGAKPNVV AYTALISGLA KEGRSEEAFQ FYDNMLAAGL TPDDTLYSML VGSLHTDKRK DEIP

Best Arabidopsis Sequence Match ( AT1G05670.1 )
(BLAST)

001: MKKPFTGLLM KRGTLSSFRN FIQLFSLQSR GLSFSTLTDT RPFPDYSPKK ASVRDTEFVH QITNVIKLRR AEPLRRSLKP YECKFKTDHL IWVLMKIKCD
101: YRLVLDFFDW ARSRRDSNLE SLCIVIHLAV ASKDLKVAQS LISSFWERPK LNVTDSFVQF FDLLVYTYKD WGSDPRVFDV FFQVLVDFGL LREARRVFEK
201: MLNYGLVLSV DSCNVYLTRL SKDCYKTATA IIVFREFPEV GVCWNVASYN IVIHFVCQLG RIKEAHHLLL LMELKGYTPD VISYSTVVNG YCRFGELDKV
301: WKLIEVMKRK GLKPNSYIYG SIIGLLCRIC KLAEAEEAFS EMIRQGILPD TVVYTTLIDG FCKRGDIRAA SKFFYEMHSR DITPDVLTYT AIISGFCQIG
401: DMVEAGKLFH EMFCKGLEPD SVTFTELING YCKAGHMKDA FRVHNHMIQA GCSPNVVTYT TLIDGLCKEG DLDSANELLH EMWKIGLQPN IFTYNSIVNG
501: LCKSGNIEEA VKLVGEFEAA GLNADTVTYT TLMDAYCKSG EMDKAQEILK EMLGKGLQPT IVTFNVLMNG FCLHGMLEDG EKLLNWMLAK GIAPNATTFN
601: SLVKQYCIRN NLKAATAIYK DMCSRGVGPD GKTYENLVKG HCKARNMKEA WFLFQEMKGK GFSVSVSTYS VLIKGFLKRK KFLEAREVFD QMRREGLAAD
701: KEIFDFFSDT KYKGKRPDTI VDPIDEIIEN YLVDEQLRGA N

Arabidopsis Description

Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A068FPW3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.