Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79463 | Canola | plastid | 79.81 | 80.71 |
| CDX84733 | Canola | plastid | 79.01 | 80.29 |
| Bra022891.1-P | Field mustard | plastid | 79.01 | 80.29 |
| VIT_08s0040g01530.t01 | Wine grape | cytosol | 51.44 | 51.77 |
| HORVU2Hr1G019920.1 | Barley | cytosol | 26.76 | 44.65 |
| GSMUA_Achr11P... | Banana | cytosol | 34.94 | 44.4 |
| KRG90304 | Soybean | cytosol | 39.26 | 43.67 |
| KRH33556 | Soybean | cytosol | 13.94 | 41.63 |
| TraesCS2A01G114800.1 | Wheat | plastid | 34.29 | 39.78 |
| EER99880 | Sorghum | cytosol | 30.45 | 39.75 |
| TraesCS2B01G133900.1 | Wheat | plastid | 34.13 | 39.59 |
| Os07t0671200-00 | Rice | extracellular | 34.78 | 39.38 |
| PGSC0003DMT400027103 | Potato | cytosol | 25.64 | 39.12 |
| Zm00001d007125_P001 | Maize | endoplasmic reticulum, plastid | 33.33 | 38.73 |
| Zm00001d007129_P001 | Maize | endoplasmic reticulum, plastid | 33.01 | 38.36 |
| HORVU2Hr1G019880.2 | Barley | cytosol | 22.12 | 38.33 |
| Zm00001d007127_P001 | Maize | endoplasmic reticulum, plastid | 31.73 | 38.0 |
| Solyc10g084080.1.1 | Tomato | cytosol, extracellular | 30.45 | 37.04 |
| TraesCS2D01G115600.1 | Wheat | cytosol, plastid | 34.46 | 36.75 |
| KRG93154 | Soybean | plastid | 46.15 | 30.16 |
| PGSC0003DMT400027098 | Potato | cytosol | 28.04 | 28.32 |
| PGSC0003DMT400027113 | Potato | cytosol, plastid | 41.99 | 25.94 |
| AT4G11690.1 | Thale cress | endoplasmic reticulum | 23.24 | 25.62 |
| AT2G28050.1 | Thale cress | cytosol, plastid | 18.91 | 25.54 |
| AT1G09820.1 | Thale cress | mitochondrion, plastid | 23.88 | 24.59 |
| AT2G15630.1 | Thale cress | mitochondrion | 23.56 | 23.45 |
| AT1G09680.1 | Thale cress | mitochondrion | 22.44 | 23.06 |
| AT5G38730.1 | Thale cress | cytosol | 21.96 | 22.99 |
| AT5G61400.1 | Thale cress | mitochondrion | 23.4 | 22.32 |
| AT2G01740.1 | Thale cress | cytosol | 19.71 | 22.0 |
| AT1G05670.3 | Thale cress | mitochondrion | 25.96 | 21.86 |
| AT4G26680.1 | Thale cress | mitochondrion | 17.95 | 21.5 |
| AT5G39710.1 | Thale cress | mitochondrion | 25.64 | 21.42 |
| Solyc10g084090.1.1 | Tomato | cytosol | 45.19 | 21.09 |
| AT1G11710.1 | Thale cress | mitochondrion | 21.63 | 20.55 |
| AT5G01110.2 | Thale cress | cytosol, plastid | 24.84 | 20.48 |
| AT2G02150.1 | Thale cress | mitochondrion, plastid | 24.84 | 20.37 |
| AT1G22960.1 | Thale cress | mitochondrion | 23.08 | 20.06 |
| AT4G19890.1 | Thale cress | plastid | 21.47 | 19.12 |
| AT5G40400.2 | Thale cress | cytosol | 20.67 | 18.94 |
| AT2G16880.1 | Thale cress | cytosol | 20.67 | 17.36 |
| AT2G19280.1 | Thale cress | mitochondrion | 19.07 | 17.17 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | EntrezGene:817823 | ProteinID:AAM14987.1 | ProteinID:AEC08707.1 | ArrayExpress:AT2G32630 |
| EnsemblPlantsGene:AT2G32630 | RefSeq:AT2G32630 | TAIR:AT2G32630 | RefSeq:AT2G32630-TAIR-G | EnsemblPlants:AT2G32630.1 | TAIR:AT2G32630.1 |
| Unigene:At.66292 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 |
| GO:GO:0004519 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009451 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0043231 | GO:GO:0090305 | InterPro:IPR002885 | InterPro:IPR011990 | RefSeq:NP_180822.1 | PFAM:PF01535 |
| PFAM:PF12854 | PFAM:PF13041 | PFAM:PF13812 | PO:PO:0000084 | PFscan:PS51375 | PANTHER:PTHR24015 |
| PANTHER:PTHR24015:SF418 | InterPro:Pentatricopeptide_repeat | UniProt:Q8S8P6 | SUPFAM:SSF81901 | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf |
| UniParc:UPI00000A7B56 | SEG:seg | : | : | : | : |
Description
Pentatricopeptide repeat-containing protein At2g32630 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8P6]
Coordinates
chr2:+:13844780..13846708
Molecular Weight (calculated)
70898.9 Da
IEP (calculated)
8.161
GRAVY (calculated)
-0.225
Length
624 amino acids
Sequence
(BLAST)
(BLAST)
001: MNMSSSSRKL SRLFNIVTQN QKSPVLLSSD QEAARRITAC LVEKSTIGKL QSNPSLLFNL NSNVTRLVLS EPTLPTQSCI DFFKLLREFE SNLKPDLTAV
101: VTLSHRLYSN RRFNEMRSLL NSVVNDGFYK RPVEELGSAM VDCDISEEKF EFFEKFFDLV FRVYVDNGMF EEGLRVFDYM VKKGLSIDER SCIVFLVAAK
201: KRRRIDLCLE IFRRMVDSGV KITVYSLTIV VEGLCRRGEV EKSKKLIKEF SVKGIKPEAY TYNTIINAYV KQRDFSGVEG VLKVMKKDGV VYNKVTYTLL
301: MELSVKNGKM SDAEKLFDEM RERGIESDVH VYTSLISWNC RKGNMKRAFL LFDELTEKGL SPSSYTYGAL IDGVCKVGEM GAAEILMNEM QSKGVNITQV
401: VFNTLIDGYC RKGMVDEASM IYDVMEQKGF QADVFTCNTI ASCFNRLKRY DEAKQWLFRM MEGGVKLSTV SYTNLIDVYC KEGNVEEAKR LFVEMSSKGV
501: QPNAITYNVM IYAYCKQGKI KEARKLRANM EANGMDPDSY TYTSLIHGEC IADNVDEAMR LFSEMGLKGL DQNSVTYTVM ISGLSKAGKS DEAFGLYDEM
601: KRKGYTIDNK VYTALIGSMH SPET
101: VTLSHRLYSN RRFNEMRSLL NSVVNDGFYK RPVEELGSAM VDCDISEEKF EFFEKFFDLV FRVYVDNGMF EEGLRVFDYM VKKGLSIDER SCIVFLVAAK
201: KRRRIDLCLE IFRRMVDSGV KITVYSLTIV VEGLCRRGEV EKSKKLIKEF SVKGIKPEAY TYNTIINAYV KQRDFSGVEG VLKVMKKDGV VYNKVTYTLL
301: MELSVKNGKM SDAEKLFDEM RERGIESDVH VYTSLISWNC RKGNMKRAFL LFDELTEKGL SPSSYTYGAL IDGVCKVGEM GAAEILMNEM QSKGVNITQV
401: VFNTLIDGYC RKGMVDEASM IYDVMEQKGF QADVFTCNTI ASCFNRLKRY DEAKQWLFRM MEGGVKLSTV SYTNLIDVYC KEGNVEEAKR LFVEMSSKGV
501: QPNAITYNVM IYAYCKQGKI KEARKLRANM EANGMDPDSY TYTSLIHGEC IADNVDEAMR LFSEMGLKGL DQNSVTYTVM ISGLSKAGKS DEAFGLYDEM
601: KRKGYTIDNK VYTALIGSMH SPET
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.