Factsheet for GSMUA_Achr11P11750_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G019920.1	Barley	cytosol	45.21	59.36
EER99880	Sorghum	cytosol	56.01	57.53
HORVU2Hr1G019880.2	Barley	cytosol	37.68	51.39
Zm00001d007125_P001	Maize	endoplasmic reticulum, plastid	54.99	50.28
Zm00001d007129_P001	Maize	endoplasmic reticulum, plastid	54.18	49.53
TraesCS2B01G133900.1	Wheat	plastid	54.18	49.44
Zm00001d007127_P001	Maize	endoplasmic reticulum, plastid	52.34	49.33
TraesCS2A01G114800.1	Wheat	plastid	53.97	49.26
Os07t0671200-00	Rice	extracellular	55.19	49.18
TraesCS2D01G115600.1	Wheat	cytosol, plastid	53.56	44.96
VIT_08s0040g01530.t01	Wine grape	cytosol	54.58	43.23
KRH33556	Soybean	cytosol	17.92	42.11
PGSC0003DMT400027103	Potato	cytosol	34.42	41.32
Solyc10g084080.1.1	Tomato	cytosol, extracellular	40.94	39.18
CDX84733	Canola	plastid	43.99	35.18
Bra022891.1-P	Field mustard	plastid	43.99	35.18
AT2G32630.1	Thale cress	mitochondrion, plastid	44.4	34.94
CDX79463	Canola	plastid	43.79	34.85
KRG90304	Soybean	cytosol	39.51	34.58
GSMUA_Achr8P16100_001	Banana	cytosol	18.94	34.07
GSMUA_Achr1P06500_001	Banana	cytosol	27.09	26.08
KRG93154	Soybean	plastid	47.45	24.4
GSMUA_Achr1P12600_001	Banana	extracellular	16.9	23.78
PGSC0003DMT400027113	Potato	cytosol, plastid	48.07	23.37
PGSC0003DMT400027098	Potato	cytosol	29.33	23.3
GSMUA_AchrUn_...	Banana	mitochondrion	26.48	22.61
PGSC0003DMT400040701	Potato	mitochondrion	25.05	22.36
GSMUA_Achr3P01360_001	Banana	mitochondrion	23.42	22.16
GSMUA_Achr6P34120_001	Banana	cytosol	22.0	21.73
GSMUA_AchrUn_...	Banana	cytosol	20.16	21.66
Solyc06g010270.1.1	Tomato	mitochondrion	20.16	21.38
GSMUA_Achr6P30640_001	Banana	mitochondrion, plastid	25.46	20.66
AT2G28050.1	Thale cress	cytosol, plastid	19.35	20.56
GSMUA_Achr1P12220_001	Banana	mitochondrion	27.09	19.11
GSMUA_Achr1P22450_001	Banana	mitochondrion	21.79	19.11
GSMUA_Achr1P17710_001	Banana	cytosol	23.42	18.82
GSMUA_Achr8P04810_001	Banana	mitochondrion	27.29	18.43
GSMUA_Achr6P35510_001	Banana	cytosol	25.87	18.12
GSMUA_Achr8P03570_001	Banana	mitochondrion	24.64	17.93
GSMUA_Achr5P09880_001	Banana	mitochondrion	23.42	17.22
Solyc10g084090.1.1	Tomato	cytosol	46.84	17.2
GSMUA_Achr3P04340_001	Banana	cytosol	22.81	17.02
GSMUA_Achr1P01200_001	Banana	cytosol, mitochondrion	23.42	16.24

Protein Annotations

EnsemblPlants:GSMUA_Achr11P11750_001	EnsemblPlants:GSMUA_Achr11T11750_001	EnsemblPlantsGene:GSMUA_Achr11G11750_001	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015
PANTHER:PTHR24015:SF418	PFAM:PF01535	PFAM:PF13041	PFscan:PS51375	SEG:seg	SUPFAM:SSF81901
TIGRFAMs:TIGR00756	UniParc:UPI00029601B4	UniProt:M0RRF5	MapMan:35.1	:	:

Description

Putative Pentatricopeptide repeat-containing protein At2g32630 [Source:GMGC_GENE;Acc:GSMUA_Achr11G11750_001]

Coordinates

chr11:+:10632919..10634945

Molecular Weight (calculated)

54978.1 Da

IEP (calculated)

7.017

GRAVY (calculated)

-0.190

Length

491 amino acids

Sequence
(BLAST)

001: MLFRVYSDAG MTDRALDAFE LLLGRFGRVE ERSCTIYLQA LRRSGRSDLA HRFLLRMLDL DSIDVSAYSM AIVVDGLCKN GDIKIARELI DEMFLGGLRP
101: NVMSYNSLVE HYAKRKDYGS TNDILVLMEE RGVEASVGTY TILVDAYSDS GKIDKAEKAF EEMKKKGLTG DIYAYTSMIN ANCRMGNIKR ALALFDECVE
201: RGLQPTDHTY GALINGLCKH GQMLAAEMLM DEMQHKGINL NQIILNMMID GYCKKGMVDK ALNFKAIMEK KGIELDVYTY NTMACGLCKC NKISEAKNLL
301: HVMVERGVVP NTVSYTTLID ILCKEGDMVE ARRLFREMGN KGANPSIITY NVMIVGHSKK GSIREAERLK KEMEMKGMLA DVYTYTSLIH GLCINRKLDD
401: AMNLLMEMKK RNVQANAVTY TALISGLSKE GRSDEAFRLY DEMLGAGITP DDPVYSSLVS SLHNAKEGEA LVDRNLVHRA ENSTIRSQNI G

Best Arabidopsis Sequence Match ( AT2G32630.1 )
(BLAST)

001: MNMSSSSRKL SRLFNIVTQN QKSPVLLSSD QEAARRITAC LVEKSTIGKL QSNPSLLFNL NSNVTRLVLS EPTLPTQSCI DFFKLLREFE SNLKPDLTAV
101: VTLSHRLYSN RRFNEMRSLL NSVVNDGFYK RPVEELGSAM VDCDISEEKF EFFEKFFDLV FRVYVDNGMF EEGLRVFDYM VKKGLSIDER SCIVFLVAAK
201: KRRRIDLCLE IFRRMVDSGV KITVYSLTIV VEGLCRRGEV EKSKKLIKEF SVKGIKPEAY TYNTIINAYV KQRDFSGVEG VLKVMKKDGV VYNKVTYTLL
301: MELSVKNGKM SDAEKLFDEM RERGIESDVH VYTSLISWNC RKGNMKRAFL LFDELTEKGL SPSSYTYGAL IDGVCKVGEM GAAEILMNEM QSKGVNITQV
401: VFNTLIDGYC RKGMVDEASM IYDVMEQKGF QADVFTCNTI ASCFNRLKRY DEAKQWLFRM MEGGVKLSTV SYTNLIDVYC KEGNVEEAKR LFVEMSSKGV
501: QPNAITYNVM IYAYCKQGKI KEARKLRANM EANGMDPDSY TYTSLIHGEC IADNVDEAMR LFSEMGLKGL DQNSVTYTVM ISGLSKAGKS DEAFGLYDEM
601: KRKGYTIDNK VYTALIGSMH SPET

Arabidopsis Description

Pentatricopeptide repeat-containing protein At2g32630 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8P6]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.