Factsheet for Bra022891.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84733	Canola	plastid	99.35	99.35
AT2G32630.1	Thale cress	mitochondrion, plastid	80.29	79.01
VIT_08s0040g01530.t01	Wine grape	cytosol	50.98	50.48
HORVU2Hr1G019920.1	Barley	cytosol	28.01	45.99
GSMUA_Achr11P...	Banana	cytosol	35.18	43.99
KRG90304	Soybean	cytosol	39.9	43.67
KRH33556	Soybean	cytosol	14.66	43.06
EER99880	Sorghum	cytosol	32.41	41.63
PGSC0003DMT400027103	Potato	cytosol	26.87	40.34
Os07t0671200-00	Rice	extracellular	35.99	40.11
TraesCS2B01G133900.1	Wheat	plastid	34.36	39.22
TraesCS2A01G114800.1	Wheat	plastid	34.36	39.22
Zm00001d007125_P001	Maize	endoplasmic reticulum, plastid	33.88	38.73
Zm00001d007129_P001	Maize	endoplasmic reticulum, plastid	33.39	38.17
Solyc10g084080.1.1	Tomato	cytosol, extracellular	31.76	38.01
Zm00001d007127_P001	Maize	endoplasmic reticulum, plastid	32.25	38.0
HORVU2Hr1G019880.2	Barley	cytosol	22.15	37.78
TraesCS2D01G115600.1	Wheat	cytosol, plastid	34.69	36.41
KRG93154	Soybean	plastid	47.39	30.47
PGSC0003DMT400027098	Potato	cytosol	27.04	26.86
PGSC0003DMT400027113	Potato	cytosol, plastid	42.83	26.04
Bra015229.1-P	Field mustard	mitochondrion	25.73	24.96
Bra040883.1-P	Field mustard	endoplasmic reticulum	23.29	24.87
Bra019985.1-P	Field mustard	cytosol	24.1	24.18
Bra013432.1-P	Field mustard	cytosol	19.38	24.04
Bra028204.1-P	Field mustard	cytosol	22.96	23.78
Bra015447.1-P	Field mustard	cytosol	16.78	23.62
Bra035931.1-P	Field mustard	mitochondrion	23.94	22.72
Bra020001.1-P	Field mustard	mitochondrion	21.99	22.5
Bra017434.1-P	Field mustard	cytosol, plastid	20.36	22.44
Solyc10g084090.1.1	Tomato	cytosol	47.39	21.77
Bra025651.1-P	Field mustard	mitochondrion	25.57	21.07
Bra024554.1-P	Field mustard	cytosol	11.07	20.12
Bra005695.1-P	Field mustard	mitochondrion	24.1	19.97
Bra024831.1-P	Field mustard	mitochondrion	23.62	19.81
Bra024552.1-P	Field mustard	cytosol	7.98	19.44
Bra025578.1-P	Field mustard	plastid	19.54	19.26
Bra038853.1-P	Field mustard	mitochondrion	20.36	17.96
Bra002000.1-P	Field mustard	cytosol	8.63	17.49
Bra026410.1-P	Field mustard	mitochondrion	17.92	8.34

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EnsemblPlantsGene:Bra022891	EnsemblPlants:Bra022891.1	EnsemblPlants:Bra022891.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR002885	InterPro:IPR011990	UniProt:M4E291	PFAM:PF01535
PFAM:PF12854	PFAM:PF13041	PFAM:PF13812	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF418
InterPro:Pentatricopeptide_repeat	SUPFAM:SSF81901	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000254039C	SEG:seg

Description

AT2G32630 (E=4e-235) | pentatricopeptide (PPR) repeat-containing protein

Coordinates

chrA03:+:7611194..7613038

Molecular Weight (calculated)

69325.4 Da

IEP (calculated)

8.166

GRAVY (calculated)

-0.159

Length

614 amino acids

Sequence
(BLAST)

001: MNKQMSSAKL SRLFNITTKN QTPSPLPISD KQTAARITTY LQKSTAGKLQ SNPSLLFNLN PNVTLLVLSS PSLPTQSCVD FFKLLNTFES HLKPDLPAAI
101: ALSHRLYTDR RFGEMKSLLN SVSTDGAEII GSVCVYEGKV EFLETLFDLM IRVYVDKGMF QEGLRVFDYM VEKGMRIDER SCIVFLVAAK KRLEIDLCLE
201: VFKRMVDCGV RITVYSLTIV VEVLCRRGEV EKSRKLVREF YRKGIKPEAY TYNTIINAYV KVRDFSGVEE VLKEMRKGGV GYNKVTYTLL MEMSVKNGRM
301: GDAEKLFDEM RERGVELDVY LYTSMISLCC RKGNVKRAFL LFDELVEKGL SPSSHTYGAL IDGVCKVGEM GAAEILMNEM QSGGVDITKV VFNTLINGYC
401: RKRMIDEALA VYDVMEKKGF EADVFTFNTI ASCLNRLKRY DEAKEWIFRM MEGGVRLNTV SYTNLIDVYC KEGNVEEAKR LFVEMSSKGA EPNAITYNVM
501: IDAYCKQGKV KEARKLRADM EAKGMAPDSY TYTSLIHGEC IVDNVDEALR LFREMGSKGL DQSSVTYTVM ISGLSKAGKS DEAFGFYDEM KRKGFTIDHK
601: VYTALVGSLH SPET

Best Arabidopsis Sequence Match ( AT2G32630.1 )
(BLAST)

001: MNMSSSSRKL SRLFNIVTQN QKSPVLLSSD QEAARRITAC LVEKSTIGKL QSNPSLLFNL NSNVTRLVLS EPTLPTQSCI DFFKLLREFE SNLKPDLTAV
101: VTLSHRLYSN RRFNEMRSLL NSVVNDGFYK RPVEELGSAM VDCDISEEKF EFFEKFFDLV FRVYVDNGMF EEGLRVFDYM VKKGLSIDER SCIVFLVAAK
201: KRRRIDLCLE IFRRMVDSGV KITVYSLTIV VEGLCRRGEV EKSKKLIKEF SVKGIKPEAY TYNTIINAYV KQRDFSGVEG VLKVMKKDGV VYNKVTYTLL
301: MELSVKNGKM SDAEKLFDEM RERGIESDVH VYTSLISWNC RKGNMKRAFL LFDELTEKGL SPSSYTYGAL IDGVCKVGEM GAAEILMNEM QSKGVNITQV
401: VFNTLIDGYC RKGMVDEASM IYDVMEQKGF QADVFTCNTI ASCFNRLKRY DEAKQWLFRM MEGGVKLSTV SYTNLIDVYC KEGNVEEAKR LFVEMSSKGV
501: QPNAITYNVM IYAYCKQGKI KEARKLRANM EANGMDPDSY TYTSLIHGEC IADNVDEAMR LFSEMGLKGL DQNSVTYTVM ISGLSKAGKS DEAFGLYDEM
601: KRKGYTIDNK VYTALIGSMH SPET

Arabidopsis Description

Pentatricopeptide repeat-containing protein At2g32630 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8P6]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.