Factsheet for Bra015229.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36644	Canola	mitochondrion	98.58	98.58
CDX71231	Canola	mitochondrion	95.58	95.88
AT2G15630.1	Thale cress	mitochondrion	81.83	82.62
GSMUA_Achr8P16100_001	Banana	cytosol	24.01	55.68
KRH24548	Soybean	mitochondrion	54.03	54.9
VIT_12s0055g00970.t01	Wine grape	plastid	53.55	53.47
KRH29553	Soybean	mitochondrion	35.86	51.83
Solyc01g109060.2.1	Tomato	mitochondrion	50.24	51.46
PGSC0003DMT400066731	Potato	mitochondrion, plastid	49.92	51.13
OQU81794	Sorghum	mitochondrion, peroxisome	30.49	47.89
Os04t0477200-01	Rice	endoplasmic reticulum	32.39	45.05
HORVU2Hr1G082620.1	Barley	plastid	34.76	43.48
TraesCS2D01G336100.1	Wheat	plastid	35.7	43.13
TraesCS2A01G326700.1	Wheat	plastid	35.39	42.75
TraesCS2B01G355200.1	Wheat	plastid	35.23	42.56
Zm00001d003294_P001	Maize	plastid	34.91	42.18
Bra019985.1-P	Field mustard	cytosol	27.01	27.94
Bra040883.1-P	Field mustard	endoplasmic reticulum	23.38	25.74
Bra022891.1-P	Field mustard	plastid	24.96	25.73
Bra015447.1-P	Field mustard	cytosol	17.22	25.0
Bra005695.1-P	Field mustard	mitochondrion	29.07	24.83
Bra028204.1-P	Field mustard	cytosol	23.22	24.79
Bra025578.1-P	Field mustard	plastid	23.85	24.24
Bra020001.1-P	Field mustard	mitochondrion	22.59	23.83
Bra024554.1-P	Field mustard	cytosol	12.48	23.37
Bra038853.1-P	Field mustard	mitochondrion	25.43	23.13
Bra025651.1-P	Field mustard	mitochondrion	26.7	22.68
Bra013432.1-P	Field mustard	cytosol	17.22	22.02
Bra024831.1-P	Field mustard	mitochondrion	25.12	21.72
Bra035931.1-P	Field mustard	mitochondrion	21.8	21.33
Bra024552.1-P	Field mustard	cytosol	8.37	21.03
Bra017434.1-P	Field mustard	cytosol, plastid	17.69	20.11
Bra002000.1-P	Field mustard	cytosol	9.48	19.8
Bra026410.1-P	Field mustard	mitochondrion	22.12	10.61

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EnsemblPlantsGene:Bra015229	EnsemblPlants:Bra015229.1	EnsemblPlants:Bra015229.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	InterPro:IPR002885	InterPro:IPR011990	UniProt:M4DFF6	PFAM:PF01535	PFAM:PF12854
PFAM:PF13041	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF918	InterPro:Pentatricopeptide_repeat	SUPFAM:SSF81901
TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0002544644	SEG:seg	:	:

Description

AT2G15630 (E=1e-270) | pentatricopeptide (PPR) repeat-containing protein

Coordinates

chrA10:-:3159592..3161493

Molecular Weight (calculated)

71316.1 Da

IEP (calculated)

7.438

GRAVY (calculated)

-0.140

Length

633 amino acids

Sequence
(BLAST)

001: MRQFTLPCLL RHRISILSGA AYSRTAARLS SSSTLTTSTT EPELSQPPIS SDILLDSIRS SQWHFVEQIT GKLTPSLTST TLLSLVKTPD LALNFVNRID
101: LSCLDFPTQC LAIAVVSKLS SPNPALQLLK EVITSTRISV RDIFNELVLA RARLETKSTI LLDLLVRCCC QLKLVDEAIE CFYSMKEKGF DPKTETCNCI
201: LSSLSRLNLT EKAWVFYADM YRMEIKSNIY TYNIMINVLC KEGKLKKAKG MLAMMECFGV KPNIVTYNTL VQGYSLRGRI EGARMVIKEM KSKGFKPDLQ
301: TYNPILSWMC SEGRASEVLK EMKEVGLVPD SVSYNILIRG CSNKGDLETA FAYRDEMMKK GFAPTFYTYN TLIHGLFMEN KIEAAEMLIK EIREKGIALD
401: AVTYNILING YCQLGDAKKA FALHDEMMTD GIEPTLFTYT SLIYVLCRRR KMREADELFE NVVGKGMKPD LVMYNALIDG HCSTGNMDRA FLLLKEVDKM
501: RIDPDDVTYN CLMRGLCGEG KFEEARELMG EMKRRGIKPD HISYNTLISG YSKKGDTKQA FMVRDEMLSL GFNPTLLTYN ALLKSLSKNQ DGRVAEELLM
601: EMKSEGITPN DSTYCSVVEA MSNLEQGAEK SDN

Best Arabidopsis Sequence Match ( AT2G15630.1 )
(BLAST)

001: MRRFTVPCIL RHRISILSGA GYSPAAARLS SLAQTSTPES VLPPITSEIL LESIRSSQWH IVEHVADKLT PSLVSTTLLS LVKTPNLAFN FVNHIDLYRL
101: DFQTQCLAIA VISKLSSPKP VTQLLKEVVT SRKNSIRNLF DELVLAHDRL ETKSTILFDL LVRCCCQLRM VDEAIECFYL MKEKGFYPKT ETCNHILTLL
201: SRLNRIENAW VFYADMYRME IKSNVYTFNI MINVLCKEGK LKKAKGFLGI MEVFGIKPTI VTYNTLVQGF SLRGRIEGAR LIISEMKSKG FQPDMQTYNP
301: ILSWMCNEGR ASEVLREMKE IGLVPDSVSY NILIRGCSNN GDLEMAFAYR DEMVKQGMVP TFYTYNTLIH GLFMENKIEA AEILIREIRE KGIVLDSVTY
401: NILINGYCQH GDAKKAFALH DEMMTDGIQP TQFTYTSLIY VLCRKNKTRE ADELFEKVVG KGMKPDLVMM NTLMDGHCAI GNMDRAFSLL KEMDMMSINP
501: DDVTYNCLMR GLCGEGKFEE ARELMGEMKR RGIKPDHISY NTLISGYSKK GDTKHAFMVR DEMLSLGFNP TLLTYNALLK GLSKNQEGEL AEELLREMKS
601: EGIVPNDSSF CSVIEAMSNL DAKKSDS

Arabidopsis Description

Pentatricopeptide repeat-containing protein At2g15630, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQF1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.