Factsheet for TraesCS2A01G326700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G355200.1	Wheat	plastid	97.71	97.71
TraesCS2D01G336100.1	Wheat	plastid	96.95	96.95
HORVU2Hr1G082620.1	Barley	plastid	92.75	96.05
Zm00001d003294_P001	Maize	plastid	79.39	79.39
Os04t0477200-01	Rice	endoplasmic reticulum	68.51	78.9
OQU81794	Sorghum	mitochondrion, peroxisome	60.5	78.66
GSMUA_Achr8P16100_001	Banana	cytosol	32.44	62.27
KRH24548	Soybean	mitochondrion	45.61	38.36
VIT_12s0055g00970.t01	Wine grape	plastid	46.37	38.33
Solyc01g109060.2.1	Tomato	mitochondrion	42.56	36.08
PGSC0003DMT400066731	Potato	mitochondrion, plastid	41.98	35.6
Bra015229.1-P	Field mustard	mitochondrion	42.75	35.39
CDX71231	Canola	mitochondrion	42.56	35.34
CDY36644	Canola	mitochondrion	42.56	35.23
KRH29553	Soybean	mitochondrion	29.2	34.93
AT2G15630.1	Thale cress	mitochondrion	41.79	34.93
TraesCS3A01G359100.1	Wheat	cytosol	23.09	29.51
TraesCS4A01G023000.1	Wheat	plastid	28.63	25.55
TraesCS1A01G160000.1	Wheat	mitochondrion	23.47	24.8
TraesCS2A01G114800.1	Wheat	plastid	25.19	24.54
TraesCS2A01G336700.1	Wheat	cytosol	27.86	23.97
TraesCS7A01G109000.1	Wheat	plastid	31.11	23.45
TraesCS5A01G229600.1	Wheat	mitochondrion	26.34	22.26
TraesCS6A01G371200.1	Wheat	plastid	25.0	21.94
TraesCS5A01G128400.1	Wheat	plastid	27.1	21.13
TraesCS3A01G201500.1	Wheat	cytosol, extracellular, mitochondrion, plastid	23.09	21.12
TraesCS7A01G360200.1	Wheat	mitochondrion	27.86	20.86
TraesCS4A01G045400.1	Wheat	plastid	29.58	20.69
TraesCS2A01G223300.1	Wheat	mitochondrion, plastid	30.15	20.55
TraesCS7A01G134800.1	Wheat	mitochondrion	25.19	19.64
TraesCS2A01G339000.1	Wheat	cytosol	19.08	18.21

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	InterPro:IPR002885	InterPro:IPR011990
PFAM:PF01535	PFAM:PF13041	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF918	InterPro:Pentatricopeptide_repeat
SUPFAM:SSF81901	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	EnsemblPlantsGene:TraesCS2A01G326700	EnsemblPlants:TraesCS2A01G326700.1	SEG:seg

Description

No Description!

Coordinates

chr2A:+:558466177..558467751

Molecular Weight (calculated)

56914.5 Da

IEP (calculated)

7.470

GRAVY (calculated)

-0.025

Length

524 amino acids

Sequence
(BLAST)

001: MAPPTSPAAV AAAARAAPTP AAALALFKSA LSADPALSPL AVLPHLSATP SLPHLLLTAS IAGRPHTTSL SLYSRLKSLS LPIPTATLHP LLSSLPSAPA
101: FVLFADIFRL RLPLSATTFN IMLRHLCSSG KPARALELLR QMPGPNAVTY NTIIAGFCAR GRVQAGLDIM REMRERSGIP PDKYTYATVI SGWCKVGKVE
201: EAAKVFDEML AKGEVEPNPM MYNALIGAYC DRGNLEAALR CREEMVARGV SMTVATYNLF VHALFMEGRA AEAHALVEEM GDKGLAPDAF TYNILINGYC
301: KEGKEKKAMK MFEHMAAKGI RTTVVTYTSL IYALSKKGMV QEADSLFNEA VRRGIRPDLV MYNALINSHC TGGDMDRAFE IMGEMEKKRI TPDDVTYNTL
401: MRGLCLLGRL DEARGLIDKM TKRGIKPDLV SYNTLISGYS MKGDIKDALK VRDEMIDKGF NPTVMTYNAM IQGLCKNGQG EDAEELVKEM VGNGITPDDS
501: TYISLIEGLT TEDERLAAED AVKA

Best Arabidopsis Sequence Match ( AT2G15630.1 )
(BLAST)

001: MRRFTVPCIL RHRISILSGA GYSPAAARLS SLAQTSTPES VLPPITSEIL LESIRSSQWH IVEHVADKLT PSLVSTTLLS LVKTPNLAFN FVNHIDLYRL
101: DFQTQCLAIA VISKLSSPKP VTQLLKEVVT SRKNSIRNLF DELVLAHDRL ETKSTILFDL LVRCCCQLRM VDEAIECFYL MKEKGFYPKT ETCNHILTLL
201: SRLNRIENAW VFYADMYRME IKSNVYTFNI MINVLCKEGK LKKAKGFLGI MEVFGIKPTI VTYNTLVQGF SLRGRIEGAR LIISEMKSKG FQPDMQTYNP
301: ILSWMCNEGR ASEVLREMKE IGLVPDSVSY NILIRGCSNN GDLEMAFAYR DEMVKQGMVP TFYTYNTLIH GLFMENKIEA AEILIREIRE KGIVLDSVTY
401: NILINGYCQH GDAKKAFALH DEMMTDGIQP TQFTYTSLIY VLCRKNKTRE ADELFEKVVG KGMKPDLVMM NTLMDGHCAI GNMDRAFSLL KEMDMMSINP
501: DDVTYNCLMR GLCGEGKFEE ARELMGEMKR RGIKPDHISY NTLISGYSKK GDTKHAFMVR DEMLSLGFNP TLLTYNALLK GLSKNQEGEL AEELLREMKS
601: EGIVPNDSSF CSVIEAMSNL DAKKSDS

Arabidopsis Description

Pentatricopeptide repeat-containing protein At2g15630, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQF1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.