Factsheet for HORVU2Hr1G082620.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G336100.1	Wheat	plastid	97.04	93.7
TraesCS2B01G355200.1	Wheat	plastid	96.44	93.13
TraesCS2A01G326700.1	Wheat	plastid	96.05	92.75
OQU81794	Sorghum	mitochondrion, peroxisome	63.24	79.4
Os04t0477200-01	Rice	endoplasmic reticulum	71.15	79.12
Zm00001d003294_P001	Maize	plastid	78.85	76.14
GSMUA_Achr8P16100_001	Banana	cytosol	33.4	61.9
VIT_12s0055g00970.t01	Wine grape	plastid	46.84	37.38
KRH24548	Soybean	mitochondrion	45.65	37.08
Solyc01g109060.2.1	Tomato	mitochondrion	43.48	35.6
PGSC0003DMT400066731	Potato	mitochondrion, plastid	42.69	34.95
Bra015229.1-P	Field mustard	mitochondrion	43.48	34.76
CDX71231	Canola	mitochondrion	43.28	34.71
CDY36644	Canola	mitochondrion	43.28	34.6
AT2G15630.1	Thale cress	mitochondrion	42.29	34.13
KRH29553	Soybean	mitochondrion	28.66	33.1
HORVU3Hr1G086290.19	Barley	plastid	24.31	30.22
HORVU6Hr1G084410.1	Barley	cytosol, mitochondrion	12.65	29.22
HORVU2Hr1G019920.1	Barley	cytosol	20.55	27.81
HORVU1Hr1G093590.2	Barley	cytosol	13.04	27.73
HORVU1Hr1G042440.2	Barley	mitochondrion	27.08	23.91
HORVU2Hr1G019880.2	Barley	cytosol	16.21	22.78
HORVU2Hr1G080860.1	Barley	plastid	28.26	22.63
HORVU7Hr1G023200.23	Barley	cytosol	30.43	22.19
HORVU4Hr1G074200.9	Barley	mitochondrion	29.05	21.55
HORVU0Hr1G013090.3	Barley	cytosol, plastid	24.51	21.42
HORVU5Hr1G066340.2	Barley	mitochondrion	25.49	20.81
HORVU5Hr1G042300.1	Barley	plastid	29.25	20.76
HORVU7Hr1G087760.14	Barley	cytosol, mitochondrion	28.26	20.69
HORVU5Hr1G009510.3	Barley	cytosol	23.91	20.51
HORVU6Hr1G087430.7	Barley	cytosol	24.9	20.42
HORVU2Hr1G046710.2	Barley	cytosol, plastid	29.84	19.51
HORVU7Hr1G028150.1	Barley	mitochondrion	19.37	19.41
HORVU2Hr1G080360.2	Barley	mitochondrion	19.57	19.34
HORVU4Hr1G070310.1	Barley	plastid	29.25	17.7

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	UniProt:A0A287ING8	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	EnsemblPlantsGene:HORVU2Hr1G082620
EnsemblPlants:HORVU2Hr1G082620.1	InterPro:IPR002885	InterPro:IPR011990	PFAM:PF01535	PFAM:PF13041	PFscan:PS51375
PANTHER:PTHR24015	PANTHER:PTHR24015:SF918	InterPro:Pentatricopeptide_repeat	SUPFAM:SSF81901	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf
UniParc:UPI000B465ADE	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:599422164..599425097

Molecular Weight (calculated)

55278.6 Da

IEP (calculated)

7.948

GRAVY (calculated)

-0.037

Length

506 amino acids

Sequence
(BLAST)

001: XPAAALALFK SALSADPALS PLAVLPHLAA TPSLPHLLLT ASIAGRPHTT SLSLYSRLKS LSLPIPTATL HPLLSSLPSA PAFVLFADIF RLRLPLSTTT
101: FNIMLRHLCS TGKPVRALEL LRQMPSPNAV TYNTAIAGFC ARGRVQAGLD IMREMRERSG IAPDKYTYAT VISGWCKVGK VEEAAKVFEE MLAKGEVEPN
201: PMMYNSLIGA YCDRGNLEAA LHCREEMVAR GVSMTVATYN LFVHALFMEG RAAEAHALVE EMVGKGLAPD AFTYNILING YCKEGKEKKA MKMFENMAAK
301: GIRTTVVTYT SLIYALSKKG MVQEADRLFN EAVRRGIRPD LVMYNALINS HCTGGDMDRA FEIMGEMEKK RITPDDVTYN TLMRGLCLLG RLDEARGLID
401: KMTKRGIKPD LVSYNTLISG YSMKGDIKDA LKVRDEMIDK GFNPTLLTYN AMIQGLCKNG QGDDAEELVK EMVGNGITPD DSTYISLIEG LTTEDERLAR
501: EGAVKA

Best Arabidopsis Sequence Match ( AT2G15630.1 )
(BLAST)

001: MRRFTVPCIL RHRISILSGA GYSPAAARLS SLAQTSTPES VLPPITSEIL LESIRSSQWH IVEHVADKLT PSLVSTTLLS LVKTPNLAFN FVNHIDLYRL
101: DFQTQCLAIA VISKLSSPKP VTQLLKEVVT SRKNSIRNLF DELVLAHDRL ETKSTILFDL LVRCCCQLRM VDEAIECFYL MKEKGFYPKT ETCNHILTLL
201: SRLNRIENAW VFYADMYRME IKSNVYTFNI MINVLCKEGK LKKAKGFLGI MEVFGIKPTI VTYNTLVQGF SLRGRIEGAR LIISEMKSKG FQPDMQTYNP
301: ILSWMCNEGR ASEVLREMKE IGLVPDSVSY NILIRGCSNN GDLEMAFAYR DEMVKQGMVP TFYTYNTLIH GLFMENKIEA AEILIREIRE KGIVLDSVTY
401: NILINGYCQH GDAKKAFALH DEMMTDGIQP TQFTYTSLIY VLCRKNKTRE ADELFEKVVG KGMKPDLVMM NTLMDGHCAI GNMDRAFSLL KEMDMMSINP
501: DDVTYNCLMR GLCGEGKFEE ARELMGEMKR RGIKPDHISY NTLISGYSKK GDTKHAFMVR DEMLSLGFNP TLLTYNALLK GLSKNQEGEL AEELLREMKS
601: EGIVPNDSSF CSVIEAMSNL DAKKSDS

Arabidopsis Description

Pentatricopeptide repeat-containing protein At2g15630, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQF1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.