Factsheet for HORVU2Hr1G080360.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G343000.1	Wheat	cytosol, plastid	89.45	91.24
TraesCS2D01G324100.1	Wheat	plastid	89.06	90.84
HORVU6Hr1G084410.1	Barley	cytosol, mitochondrion	36.13	84.47
HORVU1Hr1G093590.2	Barley	cytosol	39.26	84.45
TraesCS2A01G339000.1	Wheat	cytosol	89.84	83.79
Os10t0363500-00	Rice	endoplasmic reticulum	72.85	72.85
Zm00001d030479_P001	Maize	plastid	66.41	67.46
GSMUA_Achr1P12600_001	Banana	extracellular	33.59	49.28
KRH44246	Soybean	cytosol	38.87	39.88
CDX94295	Canola	cytosol	13.67	39.55
VIT_12s0057g00740.t01	Wine grape	mitochondrion	39.45	38.11
PGSC0003DMT400015722	Potato	cytosol	37.5	36.23
Solyc07g047620.1.1	Tomato	cytosol, mitochondrion	36.72	35.47
AT4G26680.1	Thale cress	mitochondrion	34.77	34.17
CDX94298	Canola	mitochondrion	36.13	32.51
HORVU2Hr1G080860.1	Barley	plastid	26.56	21.52
HORVU6Hr1G087430.7	Barley	cytosol	25.59	21.23
HORVU7Hr1G028150.1	Barley	mitochondrion	20.7	20.99
HORVU3Hr1G086290.19	Barley	plastid	16.21	20.39
HORVU2Hr1G082620.1	Barley	plastid	19.34	19.57
HORVU1Hr1G042440.2	Barley	mitochondrion	21.48	19.2
HORVU5Hr1G009510.3	Barley	cytosol	22.07	19.15
HORVU2Hr1G046710.2	Barley	cytosol, plastid	25.98	17.18
HORVU2Hr1G019920.1	Barley	cytosol	12.5	17.11
HORVU7Hr1G023200.23	Barley	cytosol	23.05	17.0
HORVU5Hr1G042300.1	Barley	plastid	22.46	16.13
HORVU4Hr1G070310.1	Barley	plastid	24.41	14.95
HORVU7Hr1G087760.14	Barley	cytosol, mitochondrion	20.12	14.91
HORVU5Hr1G066340.2	Barley	mitochondrion	17.19	14.19
Bra026410.1-P	Field mustard	mitochondrion	36.33	14.1
HORVU4Hr1G074200.9	Barley	mitochondrion	18.36	13.78
CDX89313	Canola	mitochondrion	36.33	13.75
HORVU0Hr1G013090.3	Barley	cytosol, plastid	15.43	13.64
HORVU2Hr1G019880.2	Barley	cytosol	7.81	11.11

Protein Annotations

EnsemblPlants:HORVU2Hr1G080360.2	EnsemblPlantsGene:HORVU2Hr1G080360	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015	PANTHER:PTHR24015:SF1580
PFAM:PF01535	PFAM:PF13041	PFscan:PS51375	SEG:seg	TIGRFAMs:TIGR00756	UniParc:UPI000B46E0DC
UniProt:A0A287ILI0	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:582410879..582412910

Molecular Weight (calculated)

57088.0 Da

IEP (calculated)

9.840

GRAVY (calculated)

-0.108

Length

512 amino acids

Sequence
(BLAST)

001: RVRRQHPSVQ SPSPMRPPRA LPLPHFTLPP LAGEDLAFVT ALRAHLSSAP ELAPSSLSRF LPQLNHLRLS HLLLSPPRVP HDLLGSLLPS PPPPLPFSLL
101: LHALTPRRSS ELLASLLPSV SHQAFPELLH HLILTARLAA GIRGTGAAAP AIDVLFSACA RGNKLSQATL TFRAMRAHGL LPRVESCNVF ISAALRLKRP
201: EIAVSFFREM RRCRISPNMY TANMLLRAFC ALGRVADAAM VLDEMPDWGV DRTVVSFNTL IAAYCREHGG LEHALELKKR MELEGLTPSE LTYNTIIHGL
301: CKEGRMRQAN RLLSEMRAMR VVPNTVTFNT LIYGYVMHGD NGTASRVHEE MVKKGVELDI VTYNALILGL CRDGKIKKAE HLFQQLDRPK LEPNASTFSA
401: LILGHCKTQN SERALQLLNV MKKSGFHPNY DTYKIVISTF CKNKDFEGAV DVMKELLEMR MAPDKVLLHE FFEALSKAKK LHLAEDLQSA DKSGKFIPSI
501: YYTGDYRNKG EE

Best Arabidopsis Sequence Match ( AT4G26680.1 )
(BLAST)

001: MIRISIGVNR RLRYQFSSFA GYSGSENPRL FKTLGAANTP IPHRRNPEPK GQDLDFVNVA HSHLIQSDWD KLNKLSDHLD SFRVKNVLLK IQKDYLLSLE
101: FFNWAKTRNP GSHSLETHAI VLHTLTKNRK FKSAESILRD VLVNGGVDLP AKVFDALLYS YRECDSTPRV FDSLFKTFAH LKKFRNATDT FMQMKDYGFL
201: PTVESCNAYM SSLLGQGRVD IALRFYREMR RCKISPNPYT LNMVMSGYCR SGKLDKGIEL LQDMERLGFR ATDVSYNTLI AGHCEKGLLS SALKLKNMMG
301: KSGLQPNVVT FNTLIHGFCR AMKLQEASKV FGEMKAVNVA PNTVTYNTLI NGYSQQGDHE MAFRFYEDMV CNGIQRDILT YNALIFGLCK QAKTRKAAQF
401: VKELDKENLV PNSSTFSALI MGQCVRKNAD RGFELYKSMI RSGCHPNEQT FNMLVSAFCR NEDFDGASQV LREMVRRSIP LDSRTVHQVC NGLKHQGKDQ
501: LVKKLLQEME GKKFLQESFN N

Arabidopsis Description

Pentatricopeptide repeat-containing protein At4g26680, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ10]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.