Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G103900.1 | Wheat | plastid | 88.33 | 88.2 |
| TraesCS7A01G109000.1 | Wheat | plastid | 88.18 | 88.06 |
| TraesCS7B01G006900.1 | Wheat | plastid | 87.75 | 87.63 |
| OQU75844 | Sorghum | cytosol | 63.54 | 80.04 |
| Os06t0152500-00 | Rice | plastid | 76.95 | 76.95 |
| Zm00001d045319_P001 | Maize | plastid | 73.49 | 73.81 |
| Zm00001d010121_P001 | Maize | plastid | 73.2 | 73.52 |
| PGSC0003DMT400066275 | Potato | cytosol | 21.61 | 46.15 |
| GSMUA_Achr3P04340_001 | Banana | cytosol | 41.93 | 44.22 |
| VIT_03s0063g00930.t01 | Wine grape | cytosol, plastid | 45.1 | 41.08 |
| CDX74435 | Canola | mitochondrion | 43.08 | 40.13 |
| Bra025651.1-P | Field mustard | mitochondrion | 42.94 | 40.0 |
| CDY30265 | Canola | mitochondrion | 42.07 | 40.0 |
| AT5G39710.1 | Thale cress | mitochondrion | 42.51 | 39.49 |
| KRG89236 | Soybean | plastid | 42.51 | 37.92 |
| Solyc01g108410.1.1 | Tomato | mitochondrion | 41.79 | 37.81 |
| PGSC0003DMT400066369 | Potato | mitochondrion | 41.79 | 37.81 |
| HORVU2Hr1G019920.1 | Barley | cytosol | 18.01 | 33.42 |
| KRH49758 | Soybean | plastid | 33.86 | 33.38 |
| HORVU6Hr1G084410.1 | Barley | cytosol, mitochondrion | 10.37 | 32.88 |
| HORVU1Hr1G093590.2 | Barley | cytosol | 10.52 | 30.67 |
| HORVU2Hr1G082620.1 | Barley | plastid | 22.19 | 30.43 |
| HORVU3Hr1G086290.19 | Barley | plastid | 17.58 | 29.98 |
| HORVU1Hr1G042440.2 | Barley | mitochondrion | 22.19 | 26.88 |
| HORVU4Hr1G074200.9 | Barley | mitochondrion | 26.08 | 26.54 |
| HORVU2Hr1G019880.2 | Barley | cytosol | 13.54 | 26.11 |
| HORVU5Hr1G042300.1 | Barley | plastid | 26.8 | 26.09 |
| HORVU7Hr1G087760.14 | Barley | cytosol, mitochondrion | 25.79 | 25.9 |
| HORVU7Hr1G028150.1 | Barley | mitochondrion | 17.0 | 23.37 |
| HORVU2Hr1G080360.2 | Barley | mitochondrion | 17.0 | 23.05 |
| HORVU5Hr1G009510.3 | Barley | cytosol | 19.45 | 22.88 |
| HORVU2Hr1G080860.1 | Barley | plastid | 20.61 | 22.63 |
| HORVU4Hr1G070310.1 | Barley | plastid | 27.23 | 22.61 |
| HORVU6Hr1G087430.7 | Barley | cytosol | 20.03 | 22.53 |
| HORVU0Hr1G013090.3 | Barley | cytosol, plastid | 18.73 | 22.45 |
| HORVU2Hr1G046710.2 | Barley | cytosol, plastid | 24.5 | 21.96 |
| HORVU5Hr1G066340.2 | Barley | mitochondrion | 19.31 | 21.61 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | UniProt:A0A287VPH3 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | EnsemblPlantsGene:HORVU7Hr1G023200 |
| EnsemblPlants:HORVU7Hr1G023200.23 | InterPro:IPR002885 | InterPro:IPR011990 | PFAM:PF01535 | PFAM:PF12854 | PFAM:PF13041 |
| PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF280 | InterPro:Pentatricopeptide_repeat | SUPFAM:SSF81901 | TIGRFAMs:TIGR00756 |
| InterPro:TPR-like_helical_dom_sf | UniParc:UPI000B47D6AF | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:34913322..34915544
Molecular Weight (calculated)
71924.8 Da
IEP (calculated)
7.633
GRAVY (calculated)
0.050
Length
694 amino acids
Sequence
(BLAST)
(BLAST)
001: PLAMMELHLA TDRXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXPLS PQAAARLAAS FPPLPLLLAL LSALRLLPSP PPPRPFDALI RAYASLPSPP
101: LAAAALAFAR SAGYAPSLPA YNAVLLALSE ASLASARRFL EGSMLRVGVA PNVYTYNILV RALCARGRRQ EALAAVVDGD MRAAGCAPNA VTYNTLVAAF
201: CRAGDVGGAE RLVAAMRESG VRPSLVTFNT VVNGMCKAGR MEDARKVFDG MAREGLPPDG VSYNTLVNGY CKAGCLHEAL AVFAEMSQKG AAPDVVTFTS
301: LIHAMCRAGN LERAVALVGQ MRERGLRMNE IAFTALIDGF CKNGFLDDAL LALKEMRECR IKPSVVCYNA LINGYCRLGR MEEARQLVDE LEDKGVKPDV
401: VTYSTILSGY CKIGDTDSAF ELNRKMLKKG VIPDAITYSS LIRGLCEEKR LSDACELFEK MIQLRLQPDE FTYTTLIHGH CKEGDVEKAF SLHDEMIKQG
501: VLPDVVTYSV LIDGLSKSAR TKEAHRLLFK LYYEDPVPDN IKYEALMHCC RKAEFKSVVA LLKGFSMKGL MNEADKVYQS MLDRNWKLDG SVYGVLIHGY
601: CRGGDVMKAL SFHKQMLRCG FPPNSTSTIS LVRGLFEEGM TVEADTVIQE LLNCCSLADA ETSKALIDLN RKEGNVDAVI DVLRGMTRDG LLPG
101: LAAAALAFAR SAGYAPSLPA YNAVLLALSE ASLASARRFL EGSMLRVGVA PNVYTYNILV RALCARGRRQ EALAAVVDGD MRAAGCAPNA VTYNTLVAAF
201: CRAGDVGGAE RLVAAMRESG VRPSLVTFNT VVNGMCKAGR MEDARKVFDG MAREGLPPDG VSYNTLVNGY CKAGCLHEAL AVFAEMSQKG AAPDVVTFTS
301: LIHAMCRAGN LERAVALVGQ MRERGLRMNE IAFTALIDGF CKNGFLDDAL LALKEMRECR IKPSVVCYNA LINGYCRLGR MEEARQLVDE LEDKGVKPDV
401: VTYSTILSGY CKIGDTDSAF ELNRKMLKKG VIPDAITYSS LIRGLCEEKR LSDACELFEK MIQLRLQPDE FTYTTLIHGH CKEGDVEKAF SLHDEMIKQG
501: VLPDVVTYSV LIDGLSKSAR TKEAHRLLFK LYYEDPVPDN IKYEALMHCC RKAEFKSVVA LLKGFSMKGL MNEADKVYQS MLDRNWKLDG SVYGVLIHGY
601: CRGGDVMKAL SFHKQMLRCG FPPNSTSTIS LVRGLFEEGM TVEADTVIQE LLNCCSLADA ETSKALIDLN RKEGNVDAVI DVLRGMTRDG LLPG
001: MFLTKTLIRR SLSTFASSPS DSLLADKALT FLKRHPYQLH HLSANFTPEA ASNLLLKSQN DQALILKFLN WANPHQFFTL RCKCITLHIL TKFKLYKTAQ
101: ILAEDVAAKT LDDEYASLVF KSLQETYDLC YSTSSVFDLV VKSYSRLSLI DKALSIVHLA QAHGFMPGVL SYNAVLDATI RSKRNISFAE NVFKEMLESQ
201: VSPNVFTYNI LIRGFCFAGN IDVALTLFDK METKGCLPNV VTYNTLIDGY CKLRKIDDGF KLLRSMALKG LEPNLISYNV VINGLCREGR MKEVSFVLTE
301: MNRRGYSLDE VTYNTLIKGY CKEGNFHQAL VMHAEMLRHG LTPSVITYTS LIHSMCKAGN MNRAMEFLDQ MRVRGLCPNE RTYTTLVDGF SQKGYMNEAY
401: RVLREMNDNG FSPSVVTYNA LINGHCVTGK MEDAIAVLED MKEKGLSPDV VSYSTVLSGF CRSYDVDEAL RVKREMVEKG IKPDTITYSS LIQGFCEQRR
501: TKEACDLYEE MLRVGLPPDE FTYTALINAY CMEGDLEKAL QLHNEMVEKG VLPDVVTYSV LINGLNKQSR TREAKRLLLK LFYEESVPSD VTYHTLIENC
601: SNIEFKSVVS LIKGFCMKGM MTEADQVFES MLGKNHKPDG TAYNIMIHGH CRAGDIRKAY TLYKEMVKSG FLLHTVTVIA LVKALHKEGK VNELNSVIVH
701: VLRSCELSEA EQAKVLVEIN HREGNMDVVL DVLAEMAKDG FLPNGIS
101: ILAEDVAAKT LDDEYASLVF KSLQETYDLC YSTSSVFDLV VKSYSRLSLI DKALSIVHLA QAHGFMPGVL SYNAVLDATI RSKRNISFAE NVFKEMLESQ
201: VSPNVFTYNI LIRGFCFAGN IDVALTLFDK METKGCLPNV VTYNTLIDGY CKLRKIDDGF KLLRSMALKG LEPNLISYNV VINGLCREGR MKEVSFVLTE
301: MNRRGYSLDE VTYNTLIKGY CKEGNFHQAL VMHAEMLRHG LTPSVITYTS LIHSMCKAGN MNRAMEFLDQ MRVRGLCPNE RTYTTLVDGF SQKGYMNEAY
401: RVLREMNDNG FSPSVVTYNA LINGHCVTGK MEDAIAVLED MKEKGLSPDV VSYSTVLSGF CRSYDVDEAL RVKREMVEKG IKPDTITYSS LIQGFCEQRR
501: TKEACDLYEE MLRVGLPPDE FTYTALINAY CMEGDLEKAL QLHNEMVEKG VLPDVVTYSV LINGLNKQSR TREAKRLLLK LFYEESVPSD VTYHTLIENC
601: SNIEFKSVVS LIKGFCMKGM MTEADQVFES MLGKNHKPDG TAYNIMIHGH CRAGDIRKAY TLYKEMVKSG FLLHTVTVIA LVKALHKEGK VNELNSVIVH
701: VLRSCELSEA EQAKVLVEIN HREGNMDVVL DVLAEMAKDG FLPNGIS
Arabidopsis Description
EMB2745Pentatricopeptide repeat-containing protein At5g39710 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIX3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.