Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G103900.1 | Wheat | plastid | 97.55 | 97.55 |
| TraesCS7B01G006900.1 | Wheat | plastid | 96.26 | 96.26 |
| HORVU7Hr1G023200.23 | Barley | cytosol | 88.06 | 88.18 |
| Os06t0152500-00 | Rice | plastid | 81.73 | 81.84 |
| OQU75844 | Sorghum | cytosol | 63.88 | 80.58 |
| Zm00001d045319_P001 | Maize | plastid | 76.26 | 76.7 |
| Zm00001d010121_P001 | Maize | plastid | 75.97 | 76.41 |
| PGSC0003DMT400066275 | Potato | cytosol | 22.73 | 48.62 |
| GSMUA_Achr3P04340_001 | Banana | cytosol | 42.88 | 45.29 |
| VIT_03s0063g00930.t01 | Wine grape | cytosol, plastid | 46.91 | 42.78 |
| CDX74435 | Canola | mitochondrion | 43.88 | 40.94 |
| CDY30265 | Canola | mitochondrion | 42.88 | 40.82 |
| Bra025651.1-P | Field mustard | mitochondrion | 43.74 | 40.81 |
| AT5G39710.1 | Thale cress | mitochondrion | 43.45 | 40.43 |
| KRG89236 | Soybean | plastid | 44.46 | 39.72 |
| PGSC0003DMT400066369 | Potato | mitochondrion | 43.45 | 39.37 |
| Solyc01g108410.1.1 | Tomato | mitochondrion | 43.17 | 39.11 |
| KRH49758 | Soybean | plastid | 35.25 | 34.8 |
| TraesCS4A01G023000.1 | Wheat | plastid | 26.91 | 31.86 |
| TraesCS2A01G326700.1 | Wheat | plastid | 23.45 | 31.11 |
| TraesCS3A01G359100.1 | Wheat | cytosol | 17.84 | 30.24 |
| TraesCS2A01G114800.1 | Wheat | plastid | 22.88 | 29.55 |
| TraesCS1A01G160000.1 | Wheat | mitochondrion | 20.43 | 28.63 |
| TraesCS7A01G360200.1 | Wheat | mitochondrion | 26.47 | 26.29 |
| TraesCS5A01G128400.1 | Wheat | plastid | 25.32 | 26.19 |
| TraesCS7A01G134800.1 | Wheat | mitochondrion | 24.46 | 25.3 |
| TraesCS2A01G336700.1 | Wheat | cytosol | 22.16 | 25.29 |
| TraesCS4A01G045400.1 | Wheat | plastid | 27.19 | 25.23 |
| TraesCS3A01G201500.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 20.43 | 24.78 |
| TraesCS6A01G371200.1 | Wheat | plastid | 20.86 | 24.29 |
| TraesCS2A01G223300.1 | Wheat | mitochondrion, plastid | 26.19 | 23.67 |
| TraesCS5A01G229600.1 | Wheat | mitochondrion | 20.14 | 22.58 |
| TraesCS2A01G339000.1 | Wheat | cytosol | 17.55 | 22.22 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | InterPro:IPR002885 | InterPro:IPR011990 |
| PFAM:PF01535 | PFAM:PF12854 | PFAM:PF13041 | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF280 |
| InterPro:Pentatricopeptide_repeat | SUPFAM:SSF81901 | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | EnsemblPlantsGene:TraesCS7A01G109000 | EnsemblPlants:TraesCS7A01G109000.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:66232775..66234862
Molecular Weight (calculated)
74999.4 Da
IEP (calculated)
8.085
GRAVY (calculated)
0.020
Length
695 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPARQAAGA SGSHHQHPVQ HAHLAALLNP TPRTPPLPSP LRRRHLPLSP QAASRLAASF PPLPLLLALL SALRLLPSPP PPRPFDALIR AYASLPSPSL
101: AAAALAFARS AGYAPSLPAY NAVLLALSDA SLASARRFLE GSMLRAGVAP NVYTYNILVR ALCARGRREE ALAAVVDGDM RAAGCAPNAV TYNTLVAAFC
201: RAGDVGGAER LVAAMREAGV RPSLVTFNTV VNGMCKAGRM EDARKVFDGM AREGLAPDGV SYNTLVSGYC KSGCLHEALT VFSEMSQKGV APDVVTFTSL
301: IHAMCSAGNL ERAVALVGQM KERGLRMNEI AFTALIDGFC KNGFLDDALL ALKEMRECRI KPSVVCYNAL INGYCKLGRM EEAGQLVDEM EAKGVKPDVV
401: TYSTILSGYC KIGDTDSAFE LNRKMVKKGV VPDAITYSSL IRGLCEEKKL GDACELFEKM LQLGLQPDEF TYTTLIDGHC KEGDVEKALS LHDEMIKKGV
501: LPDVVTYSVL IDGLSKSART KEAQRLLFKL YYEDPVPDNI KYEALMRCCR KAEFKSVVAL LKGFSMKGLM NEADKVYQSM LDRDWKLDGS VYGVLIHGHC
601: RGGNVLKALN FHKKMLQCGF PPNSTSTISL VRGLFEEGMT VEADTVIQEL LNCCSLADAE TSKALIDLNR KEGNVDAVVD VLRGMTRDGL LPSSG
101: AAAALAFARS AGYAPSLPAY NAVLLALSDA SLASARRFLE GSMLRAGVAP NVYTYNILVR ALCARGRREE ALAAVVDGDM RAAGCAPNAV TYNTLVAAFC
201: RAGDVGGAER LVAAMREAGV RPSLVTFNTV VNGMCKAGRM EDARKVFDGM AREGLAPDGV SYNTLVSGYC KSGCLHEALT VFSEMSQKGV APDVVTFTSL
301: IHAMCSAGNL ERAVALVGQM KERGLRMNEI AFTALIDGFC KNGFLDDALL ALKEMRECRI KPSVVCYNAL INGYCKLGRM EEAGQLVDEM EAKGVKPDVV
401: TYSTILSGYC KIGDTDSAFE LNRKMVKKGV VPDAITYSSL IRGLCEEKKL GDACELFEKM LQLGLQPDEF TYTTLIDGHC KEGDVEKALS LHDEMIKKGV
501: LPDVVTYSVL IDGLSKSART KEAQRLLFKL YYEDPVPDNI KYEALMRCCR KAEFKSVVAL LKGFSMKGLM NEADKVYQSM LDRDWKLDGS VYGVLIHGHC
601: RGGNVLKALN FHKKMLQCGF PPNSTSTISL VRGLFEEGMT VEADTVIQEL LNCCSLADAE TSKALIDLNR KEGNVDAVVD VLRGMTRDGL LPSSG
001: MFLTKTLIRR SLSTFASSPS DSLLADKALT FLKRHPYQLH HLSANFTPEA ASNLLLKSQN DQALILKFLN WANPHQFFTL RCKCITLHIL TKFKLYKTAQ
101: ILAEDVAAKT LDDEYASLVF KSLQETYDLC YSTSSVFDLV VKSYSRLSLI DKALSIVHLA QAHGFMPGVL SYNAVLDATI RSKRNISFAE NVFKEMLESQ
201: VSPNVFTYNI LIRGFCFAGN IDVALTLFDK METKGCLPNV VTYNTLIDGY CKLRKIDDGF KLLRSMALKG LEPNLISYNV VINGLCREGR MKEVSFVLTE
301: MNRRGYSLDE VTYNTLIKGY CKEGNFHQAL VMHAEMLRHG LTPSVITYTS LIHSMCKAGN MNRAMEFLDQ MRVRGLCPNE RTYTTLVDGF SQKGYMNEAY
401: RVLREMNDNG FSPSVVTYNA LINGHCVTGK MEDAIAVLED MKEKGLSPDV VSYSTVLSGF CRSYDVDEAL RVKREMVEKG IKPDTITYSS LIQGFCEQRR
501: TKEACDLYEE MLRVGLPPDE FTYTALINAY CMEGDLEKAL QLHNEMVEKG VLPDVVTYSV LINGLNKQSR TREAKRLLLK LFYEESVPSD VTYHTLIENC
601: SNIEFKSVVS LIKGFCMKGM MTEADQVFES MLGKNHKPDG TAYNIMIHGH CRAGDIRKAY TLYKEMVKSG FLLHTVTVIA LVKALHKEGK VNELNSVIVH
701: VLRSCELSEA EQAKVLVEIN HREGNMDVVL DVLAEMAKDG FLPNGIS
101: ILAEDVAAKT LDDEYASLVF KSLQETYDLC YSTSSVFDLV VKSYSRLSLI DKALSIVHLA QAHGFMPGVL SYNAVLDATI RSKRNISFAE NVFKEMLESQ
201: VSPNVFTYNI LIRGFCFAGN IDVALTLFDK METKGCLPNV VTYNTLIDGY CKLRKIDDGF KLLRSMALKG LEPNLISYNV VINGLCREGR MKEVSFVLTE
301: MNRRGYSLDE VTYNTLIKGY CKEGNFHQAL VMHAEMLRHG LTPSVITYTS LIHSMCKAGN MNRAMEFLDQ MRVRGLCPNE RTYTTLVDGF SQKGYMNEAY
401: RVLREMNDNG FSPSVVTYNA LINGHCVTGK MEDAIAVLED MKEKGLSPDV VSYSTVLSGF CRSYDVDEAL RVKREMVEKG IKPDTITYSS LIQGFCEQRR
501: TKEACDLYEE MLRVGLPPDE FTYTALINAY CMEGDLEKAL QLHNEMVEKG VLPDVVTYSV LINGLNKQSR TREAKRLLLK LFYEESVPSD VTYHTLIENC
601: SNIEFKSVVS LIKGFCMKGM MTEADQVFES MLGKNHKPDG TAYNIMIHGH CRAGDIRKAY TLYKEMVKSG FLLHTVTVIA LVKALHKEGK VNELNSVIVH
701: VLRSCELSEA EQAKVLVEIN HREGNMDVVL DVLAEMAKDG FLPNGIS
Arabidopsis Description
EMB2745Pentatricopeptide repeat-containing protein At5g39710 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIX3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.