Factsheet for Os06t0152500-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G103900.1	Wheat	plastid	82.13	82.01
TraesCS7A01G109000.1	Wheat	plastid	81.84	81.73
OQU75844	Sorghum	cytosol	64.7	81.49
TraesCS7B01G006900.1	Wheat	plastid	81.56	81.44
Zm00001d045319_P001	Maize	plastid	77.95	78.29
Zm00001d010121_P001	Maize	plastid	77.67	78.0
HORVU7Hr1G023200.23	Barley	cytosol	76.95	76.95
PGSC0003DMT400066275	Potato	cytosol	22.91	48.92
GSMUA_Achr3P04340_001	Banana	cytosol	44.38	46.81
VIT_03s0063g00930.t01	Wine grape	cytosol, plastid	48.13	43.83
AT5G39710.1	Thale cress	mitochondrion	44.09	40.96
CDY30265	Canola	mitochondrion	43.08	40.96
CDX74435	Canola	mitochondrion	43.95	40.94
Bra025651.1-P	Field mustard	mitochondrion	43.8	40.81
PGSC0003DMT400066369	Potato	mitochondrion	44.81	40.55
KRG89236	Soybean	plastid	45.24	40.36
Solyc01g108410.1.1	Tomato	mitochondrion	44.24	40.03
KRH49758	Soybean	plastid	36.02	35.51
Os04t0477200-01	Rice	endoplasmic reticulum	22.62	34.51
Os04t0463300-01	Rice	cytosol	3.46	34.29
Os05t0583950-00	Rice	mitochondrion	18.3	30.98
Os07t0671200-00	Rice	extracellular	21.76	27.4
Os03t0165100-00	Rice	cytosol, mitochondrion	28.67	27.34
Os10t0484300-01	Rice	mitochondrion	22.48	26.99
Os12t0152600-01	Rice	plastid	27.38	26.54
Os06t0565000-00	Rice	mitochondrion	26.37	26.37
Os07t0513200-01	Rice	mitochondrion	27.95	25.73
Os03t0201400-02	Rice	cytosol	29.39	25.63
Os02t0827900-03	Rice	plastid	21.33	25.52
Os11t0607100-01	Rice	mitochondrion	23.49	24.29
Os10t0363500-00	Rice	endoplasmic reticulum	17.58	23.83
Os09t0417500-01	Rice	mitochondrion	21.04	23.62
Os01t0546700-00	Rice	cytosol	20.17	23.49
Os03t0201200-01	Rice	nucleus	1.87	5.58

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EntrezGene:4340159	UniProt:A0A0P0WT54	ProteinID:BAS96203.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009451	GO:GO:0009987	GO:GO:0016787
GO:GO:0043231	GO:GO:0090305	InterPro:IPR002885	InterPro:IPR011990	EnsemblPlantsGene:Os06g0152500	EnsemblPlants:Os06t0152500-00
PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF280	InterPro:Pentatricopeptide_repeat
SUPFAM:SSF81901	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00018F034F	RefSeq:XP_015644230.1	SEG:seg

Description

Hypothetical conserved gene. (Os06t0152500-00)

Coordinates

chr6:+:2710189..2712417

Molecular Weight (calculated)

75196.9 Da

IEP (calculated)

8.302

GRAVY (calculated)

0.060

Length

694 amino acids

Sequence
(BLAST)

001: MADAAAAAAG GGGSHRSVHH AHLAALLNPS PRSPPHPHPL QLHRRHLPLS LPAARRLAAA FPPLPLLLSL LAALRLLPSP PPPRPFDALI RSYASLPRPS
101: LAAAALAFAA SAGYAPSVPA YNAVLLALSD ASLPSARRFL SSMLRHGVAP NVYTYNILVR ALCARGRLEE AVGVVGDMRG AGCAPNAVTY NTLVAAFCRA
201: GELDGAERVV SLMREEGNAK PNLVTFNSMV NGLCKAGRME GARKVFDEMV REGLAPDVVS YNTLLSGYCK VGCLHESLAV FSEMTQRGLV PDVVTFTSLI
301: HATCKAGNLE QAVALVAQMR ERGLRMNEVT FTALIDGFCK KGFLDDALLA VEEMRKCGIQ PSVVCYNALI NGYCKLGRMD LARELIREME AKRVKPDVVT
401: YSTIISGYCK VGNLDSAFQL NQKMLKKGVL PDAITYSSLI RGLCEEKRLN DACELFENML QLGVQPDEFT YTTLIDGHCK EGNVEKALSL HDEMIRKGVL
501: PDVVTYSVLI NGLSKSARTK EAHRLLFKLY HEDPVPDNIK YDALMLCCSK AEFKSVVALL KGFCMKGLMK EADKVYQSML DRNWKLDGSV YSILIHGHCR
601: GGNVRKALSF HKQMLRSGFS PNSTSTISLV RGLFEEGMVV EADNAIQDLL TCCPLADAEA SKALIDLNRK EGNVDALIDV LCGMARDGLL PSSG

Best Arabidopsis Sequence Match ( AT5G39710.1 )
(BLAST)

001: MFLTKTLIRR SLSTFASSPS DSLLADKALT FLKRHPYQLH HLSANFTPEA ASNLLLKSQN DQALILKFLN WANPHQFFTL RCKCITLHIL TKFKLYKTAQ
101: ILAEDVAAKT LDDEYASLVF KSLQETYDLC YSTSSVFDLV VKSYSRLSLI DKALSIVHLA QAHGFMPGVL SYNAVLDATI RSKRNISFAE NVFKEMLESQ
201: VSPNVFTYNI LIRGFCFAGN IDVALTLFDK METKGCLPNV VTYNTLIDGY CKLRKIDDGF KLLRSMALKG LEPNLISYNV VINGLCREGR MKEVSFVLTE
301: MNRRGYSLDE VTYNTLIKGY CKEGNFHQAL VMHAEMLRHG LTPSVITYTS LIHSMCKAGN MNRAMEFLDQ MRVRGLCPNE RTYTTLVDGF SQKGYMNEAY
401: RVLREMNDNG FSPSVVTYNA LINGHCVTGK MEDAIAVLED MKEKGLSPDV VSYSTVLSGF CRSYDVDEAL RVKREMVEKG IKPDTITYSS LIQGFCEQRR
501: TKEACDLYEE MLRVGLPPDE FTYTALINAY CMEGDLEKAL QLHNEMVEKG VLPDVVTYSV LINGLNKQSR TREAKRLLLK LFYEESVPSD VTYHTLIENC
601: SNIEFKSVVS LIKGFCMKGM MTEADQVFES MLGKNHKPDG TAYNIMIHGH CRAGDIRKAY TLYKEMVKSG FLLHTVTVIA LVKALHKEGK VNELNSVIVH
701: VLRSCELSEA EQAKVLVEIN HREGNMDVVL DVLAEMAKDG FLPNGIS

Arabidopsis Description

EMB2745Pentatricopeptide repeat-containing protein At5g39710 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIX3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.