Factsheet for Bra025651.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74435	Canola	mitochondrion	99.06	99.06
AT5G39710.1	Thale cress	mitochondrion	87.11	86.88
VIT_03s0063g00930.t01	Wine grape	cytosol, plastid	65.5	64.04
KRG89236	Soybean	plastid	59.73	57.2
Solyc01g108410.1.1	Tomato	mitochondrion	58.12	56.45
PGSC0003DMT400066369	Potato	mitochondrion	57.85	56.19
OQU75844	Sorghum	cytosol	37.05	50.09
GSMUA_Achr3P04340_001	Banana	cytosol	43.22	48.94
KRH49758	Soybean	plastid	45.91	48.58
Zm00001d010121_P001	Maize	plastid	41.48	44.72
Zm00001d045319_P001	Maize	plastid	41.21	44.43
Os06t0152500-00	Rice	plastid	40.81	43.8
TraesCS7A01G109000.1	Wheat	plastid	40.81	43.74
TraesCS7D01G103900.1	Wheat	plastid	40.67	43.6
TraesCS7B01G006900.1	Wheat	plastid	40.27	43.17
HORVU7Hr1G023200.23	Barley	cytosol	40.0	42.94
Bra015447.1-P	Field mustard	cytosol	19.19	32.8
Bra013432.1-P	Field mustard	cytosol	18.93	28.48
Bra019985.1-P	Field mustard	cytosol	22.82	27.78
Bra040883.1-P	Field mustard	endoplasmic reticulum	21.21	27.48
Bra002000.1-P	Field mustard	cytosol	11.14	27.39
Bra024554.1-P	Field mustard	cytosol	12.35	27.22
Bra015229.1-P	Field mustard	mitochondrion	22.68	26.7
Bra017434.1-P	Field mustard	cytosol, plastid	19.87	26.57
Bra028204.1-P	Field mustard	cytosol	21.07	26.48
Bra024552.1-P	Field mustard	cytosol	8.86	26.19
Bra020001.1-P	Field mustard	mitochondrion	21.07	26.17
Bra024831.1-P	Field mustard	mitochondrion	25.64	26.09
Bra022891.1-P	Field mustard	plastid	21.07	25.57
Bra035931.1-P	Field mustard	mitochondrion	21.61	24.88
Bra005695.1-P	Field mustard	mitochondrion	24.56	24.7
Bra025578.1-P	Field mustard	plastid	19.46	23.27
Bra038853.1-P	Field mustard	mitochondrion	20.13	21.55
Bra026410.1-P	Field mustard	mitochondrion	19.87	11.22

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EnsemblPlantsGene:Bra025651	EnsemblPlants:Bra025651.1	EnsemblPlants:Bra025651.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	InterPro:IPR002885	InterPro:IPR011990	UniProt:M4EA44	PFAM:PF12854	PFAM:PF13041
PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF280	InterPro:Pentatricopeptide_repeat	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf
UniParc:UPI000254497E	SEG:seg	:	:	:	:

Description

AT5G39710 (E=0.0) EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745)

Coordinates

chrA04:+:7245606..7247843

Molecular Weight (calculated)

83697.8 Da

IEP (calculated)

7.495

GRAVY (calculated)

-0.083

Length

745 amino acids

Sequence
(BLAST)

001: MLISKTLIRR SLSSLASPPP NSLLVDKALT FLRRHPYQLQ HISADFTPEA ASILLLKSQN DQALILKFLN WANPHHFFTL RCKCITLHIL TNFKLYKTAQ
101: TLAEDVAAKT QDASLVFGSL QETYALCDST SSVFDLVVKS YSRLNLIDKA LSVIHLAKGH GFMPGVLSYN AVLDATIRTK RDITFAEDVF KEMLETQVSP
201: NVFTYNILIR GFCSAGNLDA ALQFFDKMEK KGCLPNVVTY NTLIDGYCKL RRIDDGFELL RAMALKGLEP NLISYNVVIN GLCREGRMKE TSLVLTEMNR
301: RGFSLDEVTY NTLIKGYCKE GNFHQALVMH AEMLRHGLSP SVITYTSLIH SMCKAGNMNR AVEFLDQMRV RGLCPNERTY TTLVDGFSQK GCMNEAYRVL
401: KEMVDHGFRP SIVTYNALIN GHCVAGKMED ARAVLEDMKE KGLAPDVVSY SIMLSGFCRS YDVHEAVRVK KEMVGKGIQP DTITYSSLIQ GFCEQRRTKE
501: ACDLFDEMLR VGLTPDEFTY TALINAHCAE GGLEKALNLH NEMVEKGLLP DVVTYSVLIN GLNKQARTRE AKRLLLKLFY DESVPSDVTY QTLIENCGNI
601: EFKSVVSLIK GFCMKGMMNE ADRVFDSMIE KNHKPDGTAY NVMIHGHCRG GDVRKAYRLY KEMVSCGFLV HTVTAIALVK AFHKEGMVDE LSSVIDNVLR
701: SCELSEAEQA KVLVEINHRE GNMDVVLDVL AEMAKDGFLP NTRRQ

Best Arabidopsis Sequence Match ( AT5G39710.1 )
(BLAST)

001: MFLTKTLIRR SLSTFASSPS DSLLADKALT FLKRHPYQLH HLSANFTPEA ASNLLLKSQN DQALILKFLN WANPHQFFTL RCKCITLHIL TKFKLYKTAQ
101: ILAEDVAAKT LDDEYASLVF KSLQETYDLC YSTSSVFDLV VKSYSRLSLI DKALSIVHLA QAHGFMPGVL SYNAVLDATI RSKRNISFAE NVFKEMLESQ
201: VSPNVFTYNI LIRGFCFAGN IDVALTLFDK METKGCLPNV VTYNTLIDGY CKLRKIDDGF KLLRSMALKG LEPNLISYNV VINGLCREGR MKEVSFVLTE
301: MNRRGYSLDE VTYNTLIKGY CKEGNFHQAL VMHAEMLRHG LTPSVITYTS LIHSMCKAGN MNRAMEFLDQ MRVRGLCPNE RTYTTLVDGF SQKGYMNEAY
401: RVLREMNDNG FSPSVVTYNA LINGHCVTGK MEDAIAVLED MKEKGLSPDV VSYSTVLSGF CRSYDVDEAL RVKREMVEKG IKPDTITYSS LIQGFCEQRR
501: TKEACDLYEE MLRVGLPPDE FTYTALINAY CMEGDLEKAL QLHNEMVEKG VLPDVVTYSV LINGLNKQSR TREAKRLLLK LFYEESVPSD VTYHTLIENC
601: SNIEFKSVVS LIKGFCMKGM MTEADQVFES MLGKNHKPDG TAYNIMIHGH CRAGDIRKAY TLYKEMVKSG FLLHTVTVIA LVKALHKEGK VNELNSVIVH
701: VLRSCELSEA EQAKVLVEIN HREGNMDVVL DVLAEMAKDG FLPNGIS

Arabidopsis Description

EMB2745Pentatricopeptide repeat-containing protein At5g39710 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIX3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.