Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36644 | Canola | mitochondrion | 83.41 | 82.62 |
| CDX71231 | Canola | mitochondrion | 82.62 | 82.09 |
| Bra015229.1-P | Field mustard | mitochondrion | 82.62 | 81.83 |
| VIT_12s0055g00970.t01 | Wine grape | plastid | 55.66 | 55.05 |
| KRH24548 | Soybean | mitochondrion | 54.55 | 54.9 |
| GSMUA_Achr8P16100_001 | Banana | cytosol | 23.29 | 53.48 |
| KRH29553 | Soybean | mitochondrion | 36.04 | 51.6 |
| Solyc01g109060.2.1 | Tomato | mitochondrion | 50.56 | 51.29 |
| PGSC0003DMT400066731 | Potato | mitochondrion, plastid | 50.08 | 50.81 |
| OQU81794 | Sorghum | mitochondrion, peroxisome | 30.14 | 46.9 |
| Os04t0477200-01 | Rice | endoplasmic reticulum | 31.9 | 43.96 |
| HORVU2Hr1G082620.1 | Barley | plastid | 34.13 | 42.29 |
| TraesCS2D01G336100.1 | Wheat | plastid | 35.09 | 41.98 |
| TraesCS2A01G326700.1 | Wheat | plastid | 34.93 | 41.79 |
| TraesCS2B01G355200.1 | Wheat | plastid | 34.77 | 41.6 |
| Zm00001d003294_P001 | Maize | plastid | 33.97 | 40.65 |
| AT1G09820.1 | Thale cress | mitochondrion, plastid | 26.16 | 27.06 |
| AT4G11690.1 | Thale cress | endoplasmic reticulum | 23.76 | 26.33 |
| AT4G26680.1 | Thale cress | mitochondrion | 21.21 | 25.53 |
| AT1G09680.1 | Thale cress | mitochondrion | 24.08 | 24.88 |
| AT5G01110.2 | Thale cress | cytosol, plastid | 29.98 | 24.83 |
| AT1G22960.1 | Thale cress | mitochondrion | 27.11 | 23.68 |
| AT2G32630.1 | Thale cress | mitochondrion, plastid | 23.45 | 23.56 |
| AT2G19280.1 | Thale cress | mitochondrion | 25.84 | 23.38 |
| AT2G02150.1 | Thale cress | mitochondrion, plastid | 27.59 | 22.73 |
| AT5G38730.1 | Thale cress | cytosol | 21.53 | 22.65 |
| AT5G40400.2 | Thale cress | cytosol | 24.56 | 22.61 |
| AT2G16880.1 | Thale cress | cytosol | 26.16 | 22.07 |
| AT5G39710.1 | Thale cress | mitochondrion | 26.0 | 21.82 |
| AT1G11710.1 | Thale cress | mitochondrion | 22.81 | 21.77 |
| AT1G05670.3 | Thale cress | mitochondrion | 25.68 | 21.73 |
| AT2G28050.1 | Thale cress | cytosol, plastid | 15.95 | 21.64 |
| AT5G61400.1 | Thale cress | mitochondrion | 21.85 | 20.95 |
| AT2G01740.1 | Thale cress | cytosol | 18.18 | 20.39 |
| AT4G19890.1 | Thale cress | plastid | 21.21 | 18.97 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | EntrezGene:816056 | ProteinID:AAD17407.1 | ProteinID:AEC06425.1 | ArrayExpress:AT2G15630 |
| EnsemblPlantsGene:AT2G15630 | RefSeq:AT2G15630 | TAIR:AT2G15630 | RefSeq:AT2G15630-TAIR-G | EnsemblPlants:AT2G15630.1 | TAIR:AT2G15630.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004519 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009451 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0043231 | GO:GO:0090305 | InterPro:IPR002885 | InterPro:IPR011990 | RefSeq:NP_179165.1 |
| PFAM:PF01535 | PFAM:PF13041 | PFAM:PF13812 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0004507 | PO:PO:0007057 | PO:PO:0007098 | PO:PO:0007115 | PO:PO:0007611 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009031 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PFscan:PS51375 |
| PANTHER:PTHR24015 | PANTHER:PTHR24015:SF918 | InterPro:Pentatricopeptide_repeat | UniProt:Q9ZQF1 | SUPFAM:SSF81901 | TIGRFAMs:TIGR00756 |
| InterPro:TPR-like_helical_dom_sf | UniParc:UPI00000A320E | SEG:seg | : | : | : |
Description
Pentatricopeptide repeat-containing protein At2g15630, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQF1]
Coordinates
chr2:+:6814453..6816568
Molecular Weight (calculated)
71050.0 Da
IEP (calculated)
7.414
GRAVY (calculated)
-0.106
Length
627 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRFTVPCIL RHRISILSGA GYSPAAARLS SLAQTSTPES VLPPITSEIL LESIRSSQWH IVEHVADKLT PSLVSTTLLS LVKTPNLAFN FVNHIDLYRL
101: DFQTQCLAIA VISKLSSPKP VTQLLKEVVT SRKNSIRNLF DELVLAHDRL ETKSTILFDL LVRCCCQLRM VDEAIECFYL MKEKGFYPKT ETCNHILTLL
201: SRLNRIENAW VFYADMYRME IKSNVYTFNI MINVLCKEGK LKKAKGFLGI MEVFGIKPTI VTYNTLVQGF SLRGRIEGAR LIISEMKSKG FQPDMQTYNP
301: ILSWMCNEGR ASEVLREMKE IGLVPDSVSY NILIRGCSNN GDLEMAFAYR DEMVKQGMVP TFYTYNTLIH GLFMENKIEA AEILIREIRE KGIVLDSVTY
401: NILINGYCQH GDAKKAFALH DEMMTDGIQP TQFTYTSLIY VLCRKNKTRE ADELFEKVVG KGMKPDLVMM NTLMDGHCAI GNMDRAFSLL KEMDMMSINP
501: DDVTYNCLMR GLCGEGKFEE ARELMGEMKR RGIKPDHISY NTLISGYSKK GDTKHAFMVR DEMLSLGFNP TLLTYNALLK GLSKNQEGEL AEELLREMKS
601: EGIVPNDSSF CSVIEAMSNL DAKKSDS
101: DFQTQCLAIA VISKLSSPKP VTQLLKEVVT SRKNSIRNLF DELVLAHDRL ETKSTILFDL LVRCCCQLRM VDEAIECFYL MKEKGFYPKT ETCNHILTLL
201: SRLNRIENAW VFYADMYRME IKSNVYTFNI MINVLCKEGK LKKAKGFLGI MEVFGIKPTI VTYNTLVQGF SLRGRIEGAR LIISEMKSKG FQPDMQTYNP
301: ILSWMCNEGR ASEVLREMKE IGLVPDSVSY NILIRGCSNN GDLEMAFAYR DEMVKQGMVP TFYTYNTLIH GLFMENKIEA AEILIREIRE KGIVLDSVTY
401: NILINGYCQH GDAKKAFALH DEMMTDGIQP TQFTYTSLIY VLCRKNKTRE ADELFEKVVG KGMKPDLVMM NTLMDGHCAI GNMDRAFSLL KEMDMMSINP
501: DDVTYNCLMR GLCGEGKFEE ARELMGEMKR RGIKPDHISY NTLISGYSKK GDTKHAFMVR DEMLSLGFNP TLLTYNALLK GLSKNQEGEL AEELLREMKS
601: EGIVPNDSSF CSVIEAMSNL DAKKSDS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.