CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99196	Soybean	cytosol	64.82	91.1
VIT_01s0026g01280.t01	Wine grape	mitochondrion, plastid	69.68	69.12
CDY10136	Canola	cytosol	29.78	60.38
PGSC0003DMT400058276	Potato	mitochondrion	61.19	60.37
AT1G05670.3	Thale cress	mitochondrion	59.03	59.11
Bra015447.1-P	Field mustard	cytosol	33.96	57.8
CDY47261	Canola	plastid	56.74	57.75
OQU90004	Sorghum	cytosol	35.18	54.95
GSMUA_Achr8P04810_001	Banana	mitochondrion	51.35	52.41
Os07t0513200-01	Rice	mitochondrion	45.42	44.7
Zm00001d006478_P001	Maize	mitochondrion	44.2	44.03
TraesCS2D01G229300.1	Wheat	mitochondrion	43.26	43.03
TraesCS2B01G273600.1	Wheat	plastid	42.99	42.76
TraesCS2A01G223300.1	Wheat	mitochondrion, plastid	43.26	41.74
HORVU2Hr1G046710.2	Barley	cytosol, plastid	43.26	41.47
KRH33556	Soybean	cytosol	9.16	32.54
KRH14574	Soybean	plastid	26.42	30.62
KRH29211	Soybean	cytosol	23.45	29.85
KRH42458	Soybean	plastid	29.51	29.16
KRH16451	Soybean	plastid	26.68	28.82
KRH18049	Soybean	plastid	26.68	28.82
KRH24548	Soybean	mitochondrion	24.12	28.73
KRH17313	Soybean	mitochondrion	18.19	28.3
KRH58559	Soybean	plastid	21.7	27.47
KRH72966	Soybean	mitochondrion	22.37	26.99
KRH02112	Soybean	extracellular, mitochondrion	19.41	26.57
KRH50360	Soybean	cytosol, extracellular, plastid	19.81	26.44
KRH34922	Soybean	cytosol	16.17	26.14
KRH51875	Soybean	cytosol	19.81	25.88
KRH44246	Soybean	cytosol	17.39	25.85
KRG89236	Soybean	plastid	26.95	25.71
KRH54581	Soybean	mitochondrion	18.33	25.56
KRH29553	Soybean	mitochondrion	14.96	25.34
KRH40170	Soybean	mitochondrion	23.32	24.96
KRG90304	Soybean	cytosol	18.73	24.78
KRH56553	Soybean	plastid	20.75	24.6
KRH51037	Soybean	endoplasmic reticulum, extracellular, plastid	14.96	23.92
KRH13392	Soybean	cytosol	18.6	23.51
KRH20741	Soybean	cytosol	18.46	23.34
KRH49758	Soybean	plastid	20.62	21.73
KRG93154	Soybean	plastid	23.85	18.53

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100789069	MapMan:35.1	UniProt:A0A0R0IUH4	EMBL:ACUP02005285	EnsemblPlantsGene:GLYMA_08G294400
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009451	GO:GO:0009987	GO:GO:0016787	GO:GO:0043231
GO:GO:0090305	InterPro:IPR002885	InterPro:IPR011990	EnsemblPlants:KRH45820	ProteinID:KRH45820	ProteinID:KRH45820.1
PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF949	InterPro:Pentatricopeptide_repeat
SUPFAM:SSF81901	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00023386B7	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:+:40960608..40963642

Molecular Weight (calculated)

85358.1 Da

IEP (calculated)

8.093

GRAVY (calculated)

-0.130

Length

742 amino acids

Sequence
(BLAST)

001: MKRVAISSYF HCFHYHYHCH HNPFLGFGPR RCLSVKFSTS LGSSNARPFP DYSPRKPSVT DTDFVHHIST TIKQRRAEPF RRILKPFESK FRPDHLIWVL
101: MSIRDDYKLV LDFFDWARLR RDPSLESLCI VVQIAVASKD LRMAHRLVFE FWEKPHLDVG NSFDRFTERL IYTYKDWGAH PLVFDVFFQV LVEAGLLLEA
201: GKLFDKLLNY GVLVSVDSCN LFLARLSNSF DGIRTAFRVF REYSEVGVCW NTVSYNIILH LLCQLGKVKE AHSLLIQMEF RGNVPDVVSY SVIVDGYCQV
301: EQLGKVLKLM EELQRKGLKP NQYTYNSIIS FLCKTGRVVE AEQVLRVMKN QRIFPDNVVY TTLISGFGKS GNVSVEYKLF DEMKRKKIVP DFVTYTSMIH
401: GLCQAGKVVE ARKLFSEMLS KGLKPDEVTY TALIDGYCKA GEMKEAFSLH NQMVEKGLTP NVVTYTALVD GLCKCGEVDI ANELLHEMSE KGLQPNVCTY
501: NALINGLCKV GNIEQAVKLM EEMDLAGFFP DTITYTTIMD AYCKMGEMAK AHELLRIMLD KGLQPTIVTF NVLMNGFCMS GMLEDGERLI KWMLDKGIMP
601: NATTFNSLMK QYCIRNNMRA TIEIYKGMHA QGVVPDTNTY NILIKGHCKA RNMKEAWFLH KEMVEKGFSL TAASYNSLIK GFYKRKKFEE ARKLFEEMRT
701: HGFIAEKEIY DIFVDVNYEE GNWENTLELC DEAIEKCLVK KT

Best Arabidopsis Sequence Match ( AT1G05670.3 )
(BLAST)

001: MKKPFTGLLM KRGTLSSFRN FIQLFSLQSR GLSFSTLTDT RPFPDYSPKK ASVRDTEFVH QITNVIKLRR AEPLRRSLKP YECKFKTDHL IWVLMKIKCD
101: YRLVLDFFDW ARSRRDSNLE SLCIVIHLAV ASKDLKVAQS LISSFWERPK LNVTDSFVQF FDLLVYTYKD WGSDPRVFDV FFQVLVDFGL LREARRVFEK
201: MLNYGLVLSV DSCNVYLTRL SKDCYKTATA IIVFREFPEV GVCWNVASYN IVIHFVCQLG RIKEAHHLLL LMELKGYTPD VISYSTVVNG YCRFGELDKV
301: WKLIEVMKRK GLKPNSYIYG SIIGLLCRIC KLAEAEEAFS EMIRQGILPD TVVYTTLIDG FCKRGDIRAA SKFFYEMHSR DITPDVLTYT AIISGFCQIG
401: DMVEAGKLFH EMFCKGLEPD SVTFTELING YCKAGHMKDA FRVHNHMIQA GCSPNVVTYT TLIDGLCKEG DLDSANELLH EMWKIGLQPN IFTYNSIVNG
501: LCKSGNIEEA VKLVGEFEAA GLNADTVTYT TLMDAYCKSG EMDKAQEILK EMLGKGLQPT IVTFNVLMNG FCLHGMLEDG EKLLNWMLAK GIAPNATTFN
601: SLVKQYCIRN NLKAATAIYK DMCSRGVGPD GKTYENLVKG HCKARNMKEA WFLFQEMKGK GFSVSVSTYS VLIKGFLKRK KFLEAREVFD QMRREGLAAD
701: KEIFDFFSDT KYKGKRPDTI VDPIDEIIEN YLVDEQLRGA N

Arabidopsis Description

Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A068FPW3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.