CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015447.1-P	Field mustard	cytosol	58.71	98.17
CDY10136	Canola	cytosol	47.33	94.26
AT1G05670.3	Thale cress	mitochondrion	82.3	80.97
VIT_01s0026g01280.t01	Wine grape	mitochondrion, plastid	61.87	60.29
KRG99196	Soybean	cytosol	42.8	59.09
KRH45820	Soybean	cytosol, mitochondrion, plastid	57.75	56.74
PGSC0003DMT400058276	Potato	mitochondrion	56.38	54.65
OQU90004	Sorghum	cytosol	30.73	47.16
GSMUA_Achr8P04810_001	Banana	mitochondrion	45.27	45.39
TraesCS2D01G229300.1	Wheat	mitochondrion	39.78	38.87
TraesCS2B01G273600.1	Wheat	plastid	39.37	38.47
Zm00001d006478_P001	Maize	mitochondrion	39.09	38.26
Os07t0513200-01	Rice	mitochondrion	39.23	37.93
TraesCS2A01G223300.1	Wheat	mitochondrion, plastid	39.51	37.45
HORVU2Hr1G046710.2	Barley	cytosol, plastid	39.37	37.08
CDY17611	Canola	cytosol	25.1	30.86
CDY30265	Canola	mitochondrion	28.4	28.36
CDX74435	Canola	mitochondrion	28.53	27.92
CDY03072	Canola	mitochondrion	28.12	27.85
CDX94295	Canola	cytosol	6.72	27.68
CDY11211	Canola	mitochondrion	28.12	27.67
CDX94941	Canola	cytosol, plastid	22.77	26.99
CDY51888	Canola	cytosol, mitochondrion, plastid	18.11	26.72
CDX93473	Canola	mitochondrion	22.36	26.63
CDY17453	Canola	mitochondrion	16.74	26.58
CDY36644	Canola	mitochondrion	23.05	26.54
CDX74507	Canola	cytosol	21.54	26.48
CDY67116	Canola	cytosol	21.54	26.48
CDX86757	Canola	endoplasmic reticulum, extracellular	20.58	26.09
CDX71231	Canola	mitochondrion	22.5	25.99
CDY04100	Canola	plastid	16.32	25.93
CDY57780	Canola	endoplasmic reticulum	20.44	25.91
CDX78962	Canola	cytosol	17.56	25.86
CDX79463	Canola	plastid	21.81	25.77
CDX80791	Canola	mitochondrion	21.12	25.62
CDX84733	Canola	plastid	21.54	25.57
CDX93490	Canola	mitochondrion	20.85	25.33
CDX94298	Canola	mitochondrion	19.62	25.13
CDY49798	Canola	mitochondrion	22.22	24.96
CDY21405	Canola	cytosol	14.4	24.82
CDX94959	Canola	mitochondrion	20.44	24.51
CDX87212	Canola	plastid	21.54	24.49
CDY04764	Canola	cytosol	11.66	24.01
CDY31404	Canola	cytosol	23.73	23.35
CDY39141	Canola	mitochondrion	21.95	23.12
CDX82665	Canola	mitochondrion, plastid	21.95	23.09
CDY50117	Canola	plastid	19.2	22.47
CDY04754	Canola	cytosol	7.41	22.31
CDX71311	Canola	cytosol	21.26	22.17
CDY42586	Canola	plastid	18.79	22.1
CDY04753	Canola	mitochondrion, plastid	12.48	21.88
CDX89313	Canola	mitochondrion	21.81	11.75

Protein Annotations

EnsemblPlants:CDY47261	EnsemblPlantsGene:GSBRNA2T00087064001	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015	PANTHER:PTHR24015:SF949
PFAM:PF01535	PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	ProteinID:CDY47261	ProteinID:CDY47261.1
SUPFAM:SSF48452	TIGRFAMs:TIGR00756	UniParc:UPI0004EE9112	UniProt:A0A078IBP4	MapMan:35.1	:

Description

BnaA10g03850DBnaA10g03850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IBP4]

Coordinates

chrLK032705:+:419..2696

Molecular Weight (calculated)

82318.7 Da

IEP (calculated)

6.513

GRAVY (calculated)

-0.039

Length

729 amino acids

Sequence
(BLAST)

001: MKKGTTFALR SFIQLFSFNA RKLSSSSITD TTRPFPDYSP KKPSLRDTEL VHQIANAIKL RRAEPLRRSL KPYECKFKTD HLIWVLMKIR SDYNLVLDFF
101: EWARSRRDST LEALCIVTHL AVASKDLNVA YSLVSSFWER PKLSVNDSFV QFFDLLVYTY KDWGSDPNVF DVFFRVLVEF GMLREARKVF EKMLSYGLVL
201: SVDSCNLYLS KEKTATAVIV FKEFPEVGVC WNVASYNIVI HCVCQLGRVS EAHHLLVLME LKGYIPDVVS YSTVINGYCR FGELEKVWKL IEVMREKGLK
301: PNSYTYGSVI LLLCRSCKLA EAEEAFREMI GDGIVPDNVV YTTLIDGFCK GGNIKAASKF FYEMLSLDIA PDIVTYTAII SGFCRVGDMV EAGKLFHEMI
401: CRGLEPDSVT FTEVINGYCK AGEIKEAFSV HNRMIQAGCS PNVVTYTALI DGLCKEGDLD SANDLLHEMW KIGLQPNLFT YNSIVNGLCK SGSIEEAIKL
501: VGEFEAAGIN PDAFTYTTLM DAYCKSGEMS KAQEVLKEML GRGLEPTVVT FNVLMNGFCL NGMLEDGEKL LNWMLAKGIA PNATTYNSLV KLYCVRGDVK
601: AAAAVYKDMC AREVGPDGKT YENLIRGHCK ARNMKEAWFL YRGMVEKGFS VSAGTYSDLI KGFFKRKKFV EARDVFEQMK REGIAADKEI FDFFSDTKLK
701: GRGRTDTVVD PVDEIIENYL VDEELREAN

Best Arabidopsis Sequence Match ( AT1G05670.3 )
(BLAST)

001: MKKPFTGLLM KRGTLSSFRN FIQLFSLQSR GLSFSTLTDT RPFPDYSPKK ASVRDTEFVH QITNVIKLRR AEPLRRSLKP YECKFKTDHL IWVLMKIKCD
101: YRLVLDFFDW ARSRRDSNLE SLCIVIHLAV ASKDLKVAQS LISSFWERPK LNVTDSFVQF FDLLVYTYKD WGSDPRVFDV FFQVLVDFGL LREARRVFEK
201: MLNYGLVLSV DSCNVYLTRL SKDCYKTATA IIVFREFPEV GVCWNVASYN IVIHFVCQLG RIKEAHHLLL LMELKGYTPD VISYSTVVNG YCRFGELDKV
301: WKLIEVMKRK GLKPNSYIYG SIIGLLCRIC KLAEAEEAFS EMIRQGILPD TVVYTTLIDG FCKRGDIRAA SKFFYEMHSR DITPDVLTYT AIISGFCQIG
401: DMVEAGKLFH EMFCKGLEPD SVTFTELING YCKAGHMKDA FRVHNHMIQA GCSPNVVTYT TLIDGLCKEG DLDSANELLH EMWKIGLQPN IFTYNSIVNG
501: LCKSGNIEEA VKLVGEFEAA GLNADTVTYT TLMDAYCKSG EMDKAQEILK EMLGKGLQPT IVTFNVLMNG FCLHGMLEDG EKLLNWMLAK GIAPNATTFN
601: SLVKQYCIRN NLKAATAIYK DMCSRGVGPD GKTYENLVKG HCKARNMKEA WFLFQEMKGK GFSVSVSTYS VLIKGFLKRK KFLEAREVFD QMRREGLAAD
701: KEIFDFFSDT KYKGKRPDTI VDPIDEIIEN YLVDEQLRGA N

Arabidopsis Description

Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A068FPW3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.