Factsheet for TraesCS2D01G229300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G273600.1	Wheat	plastid	97.99	97.99
TraesCS2A01G223300.1	Wheat	mitochondrion, plastid	96.38	93.5
HORVU2Hr1G046710.2	Barley	cytosol, plastid	94.64	91.21
Os07t0513200-01	Rice	mitochondrion	79.36	78.51
OQU90004	Sorghum	cytosol	49.46	77.68
Zm00001d006478_P001	Maize	mitochondrion	75.87	75.97
CDY10136	Canola	cytosol	24.4	49.73
GSMUA_Achr8P04810_001	Banana	mitochondrion	47.86	49.11
KRG99196	Soybean	cytosol	33.91	47.92
Bra015447.1-P	Field mustard	cytosol	27.88	47.71
VIT_01s0026g01280.t01	Wine grape	mitochondrion, plastid	44.5	44.38
KRH45820	Soybean	cytosol, mitochondrion, plastid	43.03	43.26
PGSC0003DMT400058276	Potato	mitochondrion	41.96	41.62
AT1G05670.3	Thale cress	mitochondrion	40.48	40.76
CDY47261	Canola	plastid	38.87	39.78
TraesCS2D01G336100.1	Wheat	plastid	20.64	29.39
TraesCS3D01G353400.1	Wheat	cytosol	15.95	29.02
TraesCS2D01G326200.1	Wheat	mitochondrion	23.19	28.41
TraesCS4D01G279000.1	Wheat	mitochondrion	24.53	28.2
TraesCS7D01G103900.1	Wheat	plastid	24.93	26.76
TraesCS5D01G136000.1	Wheat	plastid	23.99	26.64
TraesCS2D01G324100.1	Wheat	plastid	16.89	25.1
TraesCS7D01G362900.1	Wheat	mitochondrion	20.78	25.04
TraesCS1D01G157200.1	Wheat	mitochondrion	19.17	24.91
TraesCS3D01G203500.2	Wheat	cytosol, mitochondrion	18.5	24.08
TraesCS4D01G259600.1	Wheat	cytosol	25.47	24.08
TraesCS6D01G355100.1	Wheat	plastid	18.9	23.62
TraesCS7D01G134400.2	Wheat	mitochondrion	20.91	23.28
TraesCS5D01G237900.1	Wheat	plastid	20.64	23.26
TraesCS2D01G115600.1	Wheat	cytosol, plastid	18.1	23.08

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	InterPro:IPR002885
InterPro:IPR011990	PFAM:PF01535	PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	PANTHER:PTHR24015
PANTHER:PTHR24015:SF949	InterPro:Pentatricopeptide_repeat	SUPFAM:SSF81901	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	EnsemblPlantsGene:TraesCS2D01G229300
EnsemblPlants:TraesCS2D01G229300.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:199124890..199127130

Molecular Weight (calculated)

82992.7 Da

IEP (calculated)

8.313

GRAVY (calculated)

-0.152

Length

746 amino acids

Sequence
(BLAST)

001: MLLRRTAAAA AQRSSWLSPW RTILPHVGPA RPYSATTSTS SPHRQRRSRC RTPQFTDGSL TTTSALRPFP DYSPPRPDSP ADDALARRLA AALLASPSPG
101: SLPPLPFIPL LRPLHLLLAL PLLASHPNLT SLLVPLLLLF PSRPHPHPQL IQCFAIAAHL AVREPGTARA ILVRALRFPS PHRHFVEQFI FTYKAFSSDP
201: ASFDLLLPCL PSAQLLRRLR QYGLSPSPES CNAVLSRLPL DEAIALFREL PDKNVCSHNI LLKALLSAGR LKDARQHFDE MSSPPDVVTY GTMVHGYCDR
301: GELENAVKLL DEMAAKGLES NATVYTSVIA LLCNKGQVSD ALRVVEDMTM HGVVLDAVVF TTVMSGFCSK GDLAAARRLF EEMQKRGLAA DGVTYTALIN
401: GLCRAGELKE ADRVLQEMVD KGLDVDVVTY TALIDGYCKR GNMVEAFRVH NEMVRRRVAP NVVTYTALSD GLCKQGDLRA ANELLHEMCN KGLELNVYTY
501: NSLINGLCKF GNLEQAMRIM TEMEAAGLRP DVYTYTTLID TLCKSGEFDR AHSMLQEMLD KGIKPSIATY NVLMNGFCMS GRVEGGKKLL EWMLEKNVRP
601: NVVTYNSLMK QCCIDKNMKS TTEIYKGMHS QEVAPNENTY NILIKGHCKA RNMKEALYFH HEMIEKGFRL TTSSYSALIR LLNKKKKFSE ARGLFDEMRK
701: EGLTAEPDVY SFYIDISFNE DNLESTITLC DELVEASHVK SKAGTN

Best Arabidopsis Sequence Match ( AT1G05670.3 )
(BLAST)

001: MKKPFTGLLM KRGTLSSFRN FIQLFSLQSR GLSFSTLTDT RPFPDYSPKK ASVRDTEFVH QITNVIKLRR AEPLRRSLKP YECKFKTDHL IWVLMKIKCD
101: YRLVLDFFDW ARSRRDSNLE SLCIVIHLAV ASKDLKVAQS LISSFWERPK LNVTDSFVQF FDLLVYTYKD WGSDPRVFDV FFQVLVDFGL LREARRVFEK
201: MLNYGLVLSV DSCNVYLTRL SKDCYKTATA IIVFREFPEV GVCWNVASYN IVIHFVCQLG RIKEAHHLLL LMELKGYTPD VISYSTVVNG YCRFGELDKV
301: WKLIEVMKRK GLKPNSYIYG SIIGLLCRIC KLAEAEEAFS EMIRQGILPD TVVYTTLIDG FCKRGDIRAA SKFFYEMHSR DITPDVLTYT AIISGFCQIG
401: DMVEAGKLFH EMFCKGLEPD SVTFTELING YCKAGHMKDA FRVHNHMIQA GCSPNVVTYT TLIDGLCKEG DLDSANELLH EMWKIGLQPN IFTYNSIVNG
501: LCKSGNIEEA VKLVGEFEAA GLNADTVTYT TLMDAYCKSG EMDKAQEILK EMLGKGLQPT IVTFNVLMNG FCLHGMLEDG EKLLNWMLAK GIAPNATTFN
601: SLVKQYCIRN NLKAATAIYK DMCSRGVGPD GKTYENLVKG HCKARNMKEA WFLFQEMKGK GFSVSVSTYS VLIKGFLKRK KFLEAREVFD QMRREGLAAD
701: KEIFDFFSDT KYKGKRPDTI VDPIDEIIEN YLVDEQLRGA N

Arabidopsis Description

Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A068FPW3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.