Factsheet for TraesCS7D01G134400.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G134800.1	Wheat	mitochondrion	96.27	95.98
TraesCS7B01G036200.1	Wheat	mitochondrion	95.67	95.96
HORVU7Hr1G028150.1	Barley	mitochondrion	69.1	91.68
Os11t0607100-01	Rice	mitochondrion	78.81	78.69
Zm00001d048880_P001	Maize	mitochondrion	75.22	74.56
OQU83816	Sorghum	mitochondrion	48.66	73.42
GSMUA_Achr1P12220_001	Banana	mitochondrion	56.87	54.74
Bra013432.1-P	Field mustard	cytosol	39.55	53.54
CDX78962	Canola	cytosol	39.55	53.54
CDY51888	Canola	cytosol, mitochondrion, plastid	39.4	53.44
KRH40170	Soybean	mitochondrion	49.55	47.91
VIT_01s0011g01910.t01	Wine grape	mitochondrion	50.15	47.46
AT4G19890.1	Thale cress	plastid	47.31	45.22
PGSC0003DMT400026741	Potato	mitochondrion	46.42	43.44
Solyc02g068890.2.1	Tomato	mitochondrion	45.97	43.02
TraesCS3D01G353400.1	Wheat	cytosol	18.06	29.51
TraesCS2D01G336100.1	Wheat	plastid	19.55	25.0
TraesCS2D01G115600.1	Wheat	cytosol, plastid	21.04	24.1
TraesCS7D01G103900.1	Wheat	plastid	24.93	24.03
TraesCS2D01G326200.1	Wheat	mitochondrion	19.7	21.67
TraesCS5D01G136000.1	Wheat	plastid	21.64	21.58
TraesCS2D01G324100.1	Wheat	plastid	16.12	21.51
TraesCS6D01G355100.1	Wheat	plastid	19.1	21.44
TraesCS1D01G157200.1	Wheat	mitochondrion	18.36	21.43
TraesCS4D01G279000.1	Wheat	mitochondrion	20.75	21.42
TraesCS2D01G229300.1	Wheat	mitochondrion	23.28	20.91
TraesCS7D01G362900.1	Wheat	mitochondrion	19.1	20.68
TraesCS3D01G203500.2	Wheat	cytosol, mitochondrion	17.46	20.42
TraesCS4D01G259600.1	Wheat	cytosol	23.73	20.15
TraesCS5D01G237900.1	Wheat	plastid	18.96	19.18

Protein Annotations

EnsemblPlants:TraesCS7D01G134400.2	EnsemblPlantsGene:TraesCS7D01G134400	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015	PANTHER:PTHR24015:SF325
PFAM:PF01535	PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	SEG:seg	SUPFAM:SSF81901
TIGRFAMs:TIGR00756	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:85915554..85917566

Molecular Weight (calculated)

74590.5 Da

IEP (calculated)

8.570

GRAVY (calculated)

-0.115

Length

670 amino acids

Sequence
(BLAST)

001: MQMLSRHRHG RRLLHFALKP PPLSTTNTAS APPPPPVCTP DAAPHIFSLG DHDPGALAPD DAIAALPSLA ESDGSAAALA FFRRLASRPD VRHLMRLYVT
101: AATAFVARGS LPMAHEAMRR MVAAFAEAGR LPEAADMVFE MRSHGLPFCV ETANWILRGG LDTRNFAYAR KVFDGMVTRG GVCPDARSFR ALVLGCCREG
201: RVEEVEALLA AMWGQGFCLD NATCTVVVRT FCKKGRFRDV SEFFRRMLEM GTPPNVVNYT VWIDGLCKRG HVKQAFRVLE EMVGKGLKPN VYTHTSLIDG
301: LCKIGWTERA FRLFLKLIKS SSYKPNVHTY TVMIGGYCNE GKLARAEMLL GRMVEQGLAP NTNTYTTLIS GHSKTGSFDR AFELMNKMTH EGFLPNIYTY
401: NAVIDGLLKK GKIEKAYEVL RRATTQGLEL DKVTYTIFIT EHCKQGHITY ALDLFNRMIE NGCHPDIETY TTLIATYCQQ RQMEESEKLF DKCLAIELVP
501: TTQTYTSMIA GYCKVGKSTS ALRVFDRMVQ NGCLADSVTY GALISGLCKE SRLEEARALY EGMLDKHLVP CEVTPVTLAF EYCSRERTSV ALSILDRLDK
601: RRQIHATNVL VRKLSATGNV DDASLFLKRV LDWDSAVDHV TYTGFINSCC ANNRHALASE ISDKISKKTL

Best Arabidopsis Sequence Match ( AT4G19890.1 )
(BLAST)

001: MLSLLLPKSN RFLLRTFEIP NSLCSLFFFR LISSDHESSD LSLPSSPSSS PSQCLVKSVC SLVCTSYLRQ NHVVSSPHRV NLDFDANSLT HEQAITVVAS
101: LASESGSMVA LCFFYWAVGF EKFRHFMRLY LVTADSLLAN GNLQKAHEVM RCMLRNFSEI GRLNEAVGMV MDMQNQGLTP SSITMNCVLE IAVELGLIEY
201: AENVFDEMSV RGVVPDSSSY KLMVIGCFRD GKIQEADRWL TGMIQRGFIP DNATCTLILT ALCENGLVNR AIWYFRKMID LGFKPNLINF TSLIDGLCKK
301: GSIKQAFEML EEMVRNGWKP NVYTHTALID GLCKRGWTEK AFRLFLKLVR SDTYKPNVHT YTSMIGGYCK EDKLNRAEML FSRMKEQGLF PNVNTYTTLI
401: NGHCKAGSFG RAYELMNLMG DEGFMPNIYT YNAAIDSLCK KSRAPEAYEL LNKAFSCGLE ADGVTYTILI QEQCKQNDIN QALAFFCRMN KTGFEADMRL
501: NNILIAAFCR QKKMKESERL FQLVVSLGLI PTKETYTSMI SCYCKEGDID LALKYFHNMK RHGCVPDSFT YGSLISGLCK KSMVDEACKL YEAMIDRGLS
601: PPEVTRVTLA YEYCKRNDSA NAMILLEPLD KKLWIRTVRT LVRKLCSEKK VGVAALFFQK LLEKDSSADR VTLAAFTTAC SESGKNNLVT DLTERISRGV
701: G

Arabidopsis Description

Pentatricopeptide repeat-containing protein At4g19890 [Source:UniProtKB/Swiss-Prot;Acc:P0C8Q3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.