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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • mitochondrion 3
  • plastid 1
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G359100.1 Wheat cytosol 96.34 96.34
HORVU3Hr1G086290.19 Barley plastid 87.8 88.45
Os05t0583950-00 Rice mitochondrion 74.39 74.39
OQU87837 Sorghum plastid 73.9 73.9
Zm00001d042911_P001 Maize mitochondrion, plastid 73.17 73.17
GSMUA_Achr6P34120_001 Banana cytosol 42.68 35.21
PGSC0003DMT400058577 Potato plastid 42.68 31.19
KRH50360 Soybean cytosol, extracellular, plastid 40.98 30.22
KRH51875 Soybean cytosol 41.22 29.75
VIT_06s0004g04770.t01 Wine grape plastid 40.73 29.66
KRH02112 Soybean extracellular, mitochondrion 39.02 29.52
AT4G11690.1 Thale cress endoplasmic reticulum 40.0 28.98
Bra040883.1-P Field mustard endoplasmic reticulum 40.0 28.52
CDX86757 Canola endoplasmic reticulum, extracellular 39.27 28.0
KRH51037 Soybean endoplasmic reticulum, extracellular, plastid 31.46 27.8
CDY57780 Canola endoplasmic reticulum 38.78 27.65
TraesCS2D01G336100.1 Wheat plastid 30.0 23.47
TraesCS1D01G157200.1 Wheat mitochondrion 29.02 20.73
TraesCS2D01G115600.1 Wheat cytosol, plastid 27.32 19.15
TraesCS2D01G326200.1 Wheat mitochondrion 27.8 18.72
TraesCS7D01G103900.1 Wheat plastid 31.46 18.56
TraesCS7D01G134400.2 Wheat mitochondrion 29.51 18.06
TraesCS6D01G355100.1 Wheat plastid 25.85 17.76
TraesCS4D01G279000.1 Wheat mitochondrion 28.05 17.72
TraesCS2D01G324100.1 Wheat plastid 20.49 16.73
TraesCS7D01G362900.1 Wheat mitochondrion 25.12 16.64
TraesCS5D01G136000.1 Wheat plastid 26.59 16.22
TraesCS2D01G229300.1 Wheat mitochondrion 29.02 15.95
TraesCS3D01G203500.2 Wheat cytosol, mitochondrion 21.22 15.18
TraesCS5D01G237900.1 Wheat plastid 24.39 15.11
TraesCS4D01G259600.1 Wheat cytosol 25.85 13.43
Protein Annotations
Gene3D:1.25.40.10MapMan:35.1GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0006139
GO:GO:0008150GO:GO:0008152GO:GO:0009719GO:GO:0009737GO:GO:0009987GO:GO:0080156
InterPro:IPR002885InterPro:IPR011990PFAM:PF01535PFAM:PF12854PFAM:PF13041PFscan:PS51375
PANTHER:PTHR44149PANTHER:PTHR44149:SF3InterPro:Pentatricopeptide_repeatSUPFAM:SSF81901TIGRFAMs:TIGR00756InterPro:TPR-like_helical_dom_sf
EnsemblPlantsGene:TraesCS3D01G353400EnsemblPlants:TraesCS3D01G353400.1SEG:seg:::
Description
No Description!
Coordinates
chr3D:+:464047757..464048989
Molecular Weight (calculated)
44674.1 Da
IEP (calculated)
9.354
GRAVY (calculated)
-0.163
Length
410 amino acids
Sequence
(BLAST)
001: MSATTAEAVR RLCAAGELRS ALAQLARGAK AGDGALDVAA CTALVHACCR TGDLAEARRV FGAMPRLGLA PNEVTFTALI HGHFVRGRRE EGFAFFEEMR
101: RGGVEPNIYT YNVLIGEWCR TGEFEGARRL FDEMPAKGVA RNAVSYNTLI AGLCRHGKMK DAARLLETMR KEGIRPSIVT FNLLVDGYGK AGQMSNALHF
201: SNQIRAAGHQ PNALTYNALI AGFCRARDIA RANRAFSDMK ERGLAPTNGT YTILIDALAR GGDMDKAFEM FADMGKAGLE VDVRTYGVLV HALCMEGKMK
301: DARKLFQSME EKGVKANSVI YDIMIFGYGR EGNSYKAMKL ITEMRKNGLV PNFASYGLTI RSLCNDGKCP EAEALIKDMV RAGLQPNESV SQALLNAKAR
401: QGSSTSNFFT
Best Arabidopsis Sequence Match ( AT4G11690.1 )
(BLAST)
001: MAAKSQKTLV LLANLIKFPP LKAFSLLNSP NFHEFQHTHE SISILLRLLL SGNLFSHAQS LLLQVISGKI HSQFFTSSSL LHYLTESETS KTKFRLYEVI
101: INSYVQSQSL NLSISYFNEM VDNGFVPGSN CFNYLLTFVV GSSSFNQWWS FFNENKSKVV LDVYSFGILI KGCCEAGEIE KSFDLLIELT EFGFSPNVVI
201: YTTLIDGCCK KGEIEKAKDL FFEMGKLGLV ANERTYTVLI NGLFKNGVKK QGFEMYEKMQ EDGVFPNLYT YNCVMNQLCK DGRTKDAFQV FDEMRERGVS
301: CNIVTYNTLI GGLCREMKLN EANKVVDQMK SDGINPNLIT YNTLIDGFCG VGKLGKALSL CRDLKSRGLS PSLVTYNILV SGFCRKGDTS GAAKMVKEME
401: ERGIKPSKVT YTILIDTFAR SDNMEKAIQL RLSMEELGLV PDVHTYSVLI HGFCIKGQMN EASRLFKSMV EKNCEPNEVI YNTMILGYCK EGSSYRALKL
501: LKEMEEKELA PNVASYRYMI EVLCKERKSK EAERLVEKMI DSGIDPSTSI LSLISRAKND SHVSSK
Arabidopsis Description
Pentatricopeptide repeat-containing protein At4g11690 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0D6]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.