Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 4
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 4
- golgi 4
- nucleus 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400043860 | Potato | endoplasmic reticulum, golgi | 96.31 | 96.06 |
PGSC0003DMT400043863 | Potato | endoplasmic reticulum, golgi | 96.31 | 96.06 |
VIT_01s0010g01780.t01 | Wine grape | cytosol | 45.98 | 62.77 |
GSMUA_Achr1P06500_001 | Banana | cytosol | 34.78 | 51.76 |
KRH42458 | Soybean | plastid | 50.86 | 51.4 |
CDY17611 | Canola | cytosol | 39.92 | 51.1 |
AT2G02150.1 | Thale cress | mitochondrion, plastid | 50.33 | 50.2 |
Bra024831.1-P | Field mustard | mitochondrion | 48.22 | 50.0 |
CDY03072 | Canola | mitochondrion | 48.22 | 49.73 |
KRH58559 | Soybean | plastid | 36.76 | 47.61 |
Os06t0565000-00 | Rice | mitochondrion | 38.21 | 41.79 |
TraesCS7A01G360200.1 | Wheat | mitochondrion | 38.47 | 41.71 |
TraesCS7D01G362900.1 | Wheat | mitochondrion | 33.73 | 41.36 |
HORVU7Hr1G087760.14 | Barley | cytosol, mitochondrion | 37.02 | 40.67 |
TraesCS7B01G267600.1 | Wheat | mitochondrion | 33.73 | 40.63 |
Zm00001d023302_P001 | Maize | mitochondrion | 36.36 | 39.43 |
KXG22891 | Sorghum | mitochondrion | 25.43 | 32.99 |
Solyc11g011410.1.1 | Tomato | cytosol | 17.65 | 27.92 |
Solyc01g109060.2.1 | Tomato | mitochondrion | 22.4 | 27.51 |
Solyc01g100450.1.1 | Tomato | mitochondrion | 20.95 | 26.28 |
Solyc01g108410.1.1 | Tomato | mitochondrion | 25.96 | 25.68 |
Solyc05g008560.1.1 | Tomato | mitochondrion | 24.77 | 24.93 |
Solyc07g047620.1.1 | Tomato | cytosol, mitochondrion | 17.26 | 24.72 |
Solyc10g084080.1.1 | Tomato | cytosol, extracellular | 16.6 | 24.56 |
Solyc04g050550.1.1 | Tomato | cytosol | 18.71 | 24.15 |
Solyc02g068890.2.1 | Tomato | mitochondrion | 22.53 | 23.88 |
Solyc01g111470.2.1 | Tomato | plastid | 23.19 | 23.66 |
Solyc03g007390.2.1 | Tomato | plastid | 19.37 | 23.15 |
Solyc06g010270.1.1 | Tomato | mitochondrion | 12.52 | 20.52 |
Solyc06g069700.2.1 | Tomato | plastid | 21.61 | 20.35 |
Solyc10g084090.1.1 | Tomato | cytosol | 21.34 | 12.12 |
Protein Annotations
Gene3D:1.25.40.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
GO:GO:0004518 | GO:GO:0004519 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009451 | GO:GO:0009987 |
GO:GO:0016787 | GO:GO:0043231 | GO:GO:0090305 | InterPro:IPR002885 | InterPro:IPR011990 | UniProt:K4B4X8 |
PFAM:PF01535 | PFAM:PF13041 | PFAM:PF13812 | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF329 |
InterPro:Pentatricopeptide_repeat | SUPFAM:SSF81901 | EnsemblPlantsGene:Solyc02g021280.1 | EnsemblPlants:Solyc02g021280.1.1 | TIGRFAMs:TIGR00756 | TMHMM:TMhelix |
InterPro:TPR-like_helical_dom_sf | UniParc:UPI000276880F | : | : | : | : |
Description
No Description!
Coordinates
chr2:-:22401521..22403800
Molecular Weight (calculated)
86228.4 Da
IEP (calculated)
6.984
GRAVY (calculated)
0.046
Length
759 amino acids
Sequence
(BLAST)
(BLAST)
001: MESITEATLF YLAMLIFVRG LLGITFRKSD RVSHFSSPTY TPLIPFFFVN NFLCLFRYPF STNTSNTFLD ANSIKNIIRE EKWEDDIRIA RLFDSALAPL
101: WVSQILLALK QDPRLVLRFF KWAKTQTDFY HTAEGYCIVA HILFYSRMYS DTYDVLKELV TLSNDKKVLP CSDVLDVLWS TRNACKPGYG VFDALFSVLI
201: EMGLLKEASD CFLRMRSFRV LPKARSCNYL LHRFSKLGDK NSSLKFFDDM IESGIVPTVY TYNIMIDYLC KDGDLNAAKR LFTQMKDIGI DPDIVTYNSL
301: IDGIGKHGEL EDMVSIYEEM KKSKCLPDVV TYNTLINCFC RSGRMAVAFE YLHEMKRSGL KPNLITYSIF IDVFAKEGML QGAIKFFVDM RRVGLAPNEF
401: AYTSLIDAHF KVSKVDEALK LVKEMLEVGV KLNVVTYATL VNGLCNAGNI KEAEEVFRVM LKDGIVPNLE VYTALIHGYI KSKRLVDALN ILEQMKENNI
501: KPDTLLYGVV LWSFCSDKKF EEAKVLFDKM KGLGIEGNYV IYTIFADAYF KAGKSVEAQA LLNEMQERGI SPTVVTYSAL IDGLCRLGFV QEAMDHFHSM
601: PKMGLQPNVV AYTALIHGLC RNKCLEAADK MFNEMLGKGI HPDKIVYTSL IDGNLKQGNI QDALDLRRRM TVIGLELDLH AYTALICGLS KNGQVPQARS
701: FFDEMIEKGV KPDEVVFSCL IRKYQEIGNL EEVLALQNEM MKRGLTTVTS DVAVHNMQT
101: WVSQILLALK QDPRLVLRFF KWAKTQTDFY HTAEGYCIVA HILFYSRMYS DTYDVLKELV TLSNDKKVLP CSDVLDVLWS TRNACKPGYG VFDALFSVLI
201: EMGLLKEASD CFLRMRSFRV LPKARSCNYL LHRFSKLGDK NSSLKFFDDM IESGIVPTVY TYNIMIDYLC KDGDLNAAKR LFTQMKDIGI DPDIVTYNSL
301: IDGIGKHGEL EDMVSIYEEM KKSKCLPDVV TYNTLINCFC RSGRMAVAFE YLHEMKRSGL KPNLITYSIF IDVFAKEGML QGAIKFFVDM RRVGLAPNEF
401: AYTSLIDAHF KVSKVDEALK LVKEMLEVGV KLNVVTYATL VNGLCNAGNI KEAEEVFRVM LKDGIVPNLE VYTALIHGYI KSKRLVDALN ILEQMKENNI
501: KPDTLLYGVV LWSFCSDKKF EEAKVLFDKM KGLGIEGNYV IYTIFADAYF KAGKSVEAQA LLNEMQERGI SPTVVTYSAL IDGLCRLGFV QEAMDHFHSM
601: PKMGLQPNVV AYTALIHGLC RNKCLEAADK MFNEMLGKGI HPDKIVYTSL IDGNLKQGNI QDALDLRRRM TVIGLELDLH AYTALICGLS KNGQVPQARS
701: FFDEMIEKGV KPDEVVFSCL IRKYQEIGNL EEVLALQNEM MKRGLTTVTS DVAVHNMQT
001: MFCSLRNFLH VNRRFPRHVS PSSSSLSQIQ SPLCFPLSSP SPSQSSFISC PFVWFTSFLC IIRYPFVTKS GTSTYSEDFD RDWIRKVVHN DLWDDPGLEK
101: LFDLTLAPIW VPRVLVELKE DPKLAFKFFK WSMTRNGFKH SVESYCIVAH ILFCARMYYD ANSVLKEMVL SKADCDVFDV LWSTRNVCVP GFGVFDALFS
201: VLIDLGMLEE AIQCFSKMKR FRVFPKTRSC NGLLHRFAKL GKTDDVKRFF KDMIGAGARP TVFTYNIMID CMCKEGDVEA ARGLFEEMKF RGLVPDTVTY
301: NSMIDGFGKV GRLDDTVCFF EEMKDMCCEP DVITYNALIN CFCKFGKLPI GLEFYREMKG NGLKPNVVSY STLVDAFCKE GMMQQAIKFY VDMRRVGLVP
401: NEYTYTSLID ANCKIGNLSD AFRLGNEMLQ VGVEWNVVTY TALIDGLCDA ERMKEAEELF GKMDTAGVIP NLASYNALIH GFVKAKNMDR ALELLNELKG
501: RGIKPDLLLY GTFIWGLCSL EKIEAAKVVM NEMKECGIKA NSLIYTTLMD AYFKSGNPTE GLHLLDEMKE LDIEVTVVTF CVLIDGLCKN KLVSKAVDYF
601: NRISNDFGLQ ANAAIFTAMI DGLCKDNQVE AATTLFEQMV QKGLVPDRTA YTSLMDGNFK QGNVLEALAL RDKMAEIGMK LDLLAYTSLV WGLSHCNQLQ
701: KARSFLEEMI GEGIHPDEVL CISVLKKHYE LGCIDEAVEL QSYLMKHQLL TSDNDNALPN M
101: LFDLTLAPIW VPRVLVELKE DPKLAFKFFK WSMTRNGFKH SVESYCIVAH ILFCARMYYD ANSVLKEMVL SKADCDVFDV LWSTRNVCVP GFGVFDALFS
201: VLIDLGMLEE AIQCFSKMKR FRVFPKTRSC NGLLHRFAKL GKTDDVKRFF KDMIGAGARP TVFTYNIMID CMCKEGDVEA ARGLFEEMKF RGLVPDTVTY
301: NSMIDGFGKV GRLDDTVCFF EEMKDMCCEP DVITYNALIN CFCKFGKLPI GLEFYREMKG NGLKPNVVSY STLVDAFCKE GMMQQAIKFY VDMRRVGLVP
401: NEYTYTSLID ANCKIGNLSD AFRLGNEMLQ VGVEWNVVTY TALIDGLCDA ERMKEAEELF GKMDTAGVIP NLASYNALIH GFVKAKNMDR ALELLNELKG
501: RGIKPDLLLY GTFIWGLCSL EKIEAAKVVM NEMKECGIKA NSLIYTTLMD AYFKSGNPTE GLHLLDEMKE LDIEVTVVTF CVLIDGLCKN KLVSKAVDYF
601: NRISNDFGLQ ANAAIFTAMI DGLCKDNQVE AATTLFEQMV QKGLVPDRTA YTSLMDGNFK QGNVLEALAL RDKMAEIGMK LDLLAYTSLV WGLSHCNQLQ
701: KARSFLEEMI GEGIHPDEVL CISVLKKHYE LGCIDEAVEL QSYLMKHQLL TSDNDNALPN M
Arabidopsis Description
Putative pentatricopeptide repeat-containing protein At2g02150 [Source:UniProtKB/Swiss-Prot;Acc:P0C894]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.