Factsheet for AT2G43770.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06660	Soybean	nucleus	86.01	85.51
Solyc03g059100.1.1	Tomato	nucleus	80.76	84.97
KRG94875	Soybean	nucleus	85.42	84.93
VIT_05s0094g00800.t01	Wine grape	cytosol	84.84	84.59
PGSC0003DMT400067694	Potato	cytosol	83.67	84.41
Zm00001d046930_P001	Maize	cytosol, extracellular, plasma membrane	75.22	79.14
GSMUA_Achr3P04370_001	Banana	cytosol	73.76	78.57
Zm00001d036709_P001	Maize	cytosol	74.05	77.91
EER90141	Sorghum	plastid	76.68	76.68
TraesCS7B01G406900.1	Wheat	cytosol, plastid	76.38	75.72
Os06t0653800-01	Rice	nucleus	75.51	75.51
TraesCS7A01G499900.1	Wheat	nucleus	76.09	75.43
Bra004783.1-P	Field mustard	cytosol, golgi	91.25	75.42
CDX79802	Canola	cytosol, golgi	91.25	75.42
CDY17912	Canola	cytosol, golgi	91.55	75.3
HORVU7Hr1G111780.2	Barley	cytosol, plastid	75.8	75.14
TraesCS7D01G486800.1	Wheat	cytosol, plastid	75.8	75.14
AT3G49660.1	Thale cress	cytosol	27.41	29.65
AT4G02730.1	Thale cress	cytosol	25.66	26.43
AT5G64730.1	Thale cress	cytosol	22.45	25.75
AT1G71840.1	Thale cress	nucleus	21.57	18.18
AT5G52820.1	Thale cress	cytosol	24.49	17.76
AT5G50230.1	Thale cress	cytosol	21.87	14.73
AT3G16650.1	Thale cress	cytosol	20.12	14.4
AT4G15900.1	Thale cress	cytosol	20.12	14.2
AT5G13480.2	Thale cress	nucleus	20.7	10.81
AT5G23430.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	21.57	8.84
AT5G08390.1	Thale cress	cytosol	21.28	8.7
AT1G11160.1	Thale cress	cytosol	19.83	6.66
AT1G61210.1	Thale cress	cytosol	21.28	6.18

Protein Annotations

MapMan:16.4.1.4.3	Gene3D:2.130.10.10	EntrezGene:818980	UniProt:A0A178VUX9	ProteinID:AAB64029.1	ProteinID:AEC10322.1
ArrayExpress:AT2G43770	EnsemblPlantsGene:AT2G43770	RefSeq:AT2G43770	TAIR:AT2G43770	RefSeq:AT2G43770-TAIR-G	EnsemblPlants:AT2G43770.1
TAIR:AT2G43770.1	EMBL:AY093182	InterPro:Apc4_WD40_dom	Unigene:At.66405	EMBL:BT008828	InterPro:G-protein_beta_WD-40_rep
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0008150	GO:GO:0080008	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	RefSeq:NP_181905.1
UniProt:O22826	ProteinID:OAP09626.1	PFAM:PF00400	PFAM:PF12894	PO:PO:0000013	PO:PO:0000037
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PRINTS:PR00320	ScanProsite:PS00678
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR44006	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI00000AA2EC
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	:

Description

At2g43770 [Source:UniProtKB/TrEMBL;Acc:O22826]

Coordinates

chr2:-:18134061..18136036

Molecular Weight (calculated)

37887.9 Da

IEP (calculated)

7.356

GRAVY (calculated)

-0.485

Length

343 amino acids

Sequence
(BLAST)

001: MEIMSRENET ALSGPRPMEW STVPHSASQG PGPNGKNRTS SLEAPIMLLS GHPSAVYTMK FNPAGTLIAS GSHDREIFLW RVHGDCKNFM VLKGHKNAIL
101: DLHWTSDGSQ IVSASPDKTV RAWDVETGKQ IKKMAEHSSF VNSCCPTRRG PPLIISGSDD GTAKLWDMRQ RGAIQTFPDK YQITAVSFSD AADKIFTGGV
201: DNDVKVWDLR KGEATMTLEG HQDTITGMSL SPDGSYLLTN GMDNKLCVWD MRPYAPQNRC VKIFEGHQHN FEKNLLKCSW SPDGTKVTAG SSDRMVHIWD
301: TTSRRTIYKL PGHTGSVNEC VFHPTEPIIG SCSSDKNIYL GEI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.