Factsheet for TraesCS7D01G486800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G499900.1	Wheat	nucleus	99.71	99.71
TraesCS7B01G406900.1	Wheat	cytosol, plastid	99.42	99.42
HORVU7Hr1G111780.2	Barley	cytosol, plastid	99.13	99.13
EER90141	Sorghum	plastid	94.51	95.34
Zm00001d046930_P001	Maize	cytosol, extracellular, plasma membrane	89.31	94.79
Os06t0653800-01	Rice	nucleus	93.93	94.75
Zm00001d036709_P001	Maize	cytosol	89.02	94.48
GSMUA_Achr3P04370_001	Banana	cytosol	75.72	81.37
VIT_05s0094g00800.t01	Wine grape	cytosol	77.46	77.91
Solyc03g059100.1.1	Tomato	nucleus	72.83	77.3
Bra003387.1-P	Field mustard	cytosol	74.28	76.49
KRH06660	Soybean	nucleus	75.72	75.94
PGSC0003DMT400067694	Potato	cytosol	74.57	75.88
AT2G43770.1	Thale cress	cytosol	75.14	75.8
KRG94875	Soybean	nucleus	75.14	75.36
CDX67810	Canola	cytosol	75.14	72.42
Bra004783.1-P	Field mustard	cytosol, golgi	75.43	62.89
CDX79802	Canola	cytosol, golgi	75.43	62.89
CDY17912	Canola	cytosol, golgi	75.72	62.83
CDX98392	Canola	endoplasmic reticulum, extracellular	73.99	57.79
TraesCS4D01G056800.1	Wheat	cytosol	26.59	28.75
TraesCS6D01G232000.1	Wheat	cytosol	21.1	24.33
TraesCS2D01G204900.1	Wheat	cytosol, plastid	24.57	23.55
TraesCS1D01G363000.1	Wheat	cytosol	22.83	20.05
TraesCS2D01G129200.1	Wheat	cytoskeleton, cytosol, nucleus	22.83	19.95
TraesCS1D01G451700.1	Wheat	cytosol	24.28	17.68
TraesCS3D01G181100.1	Wheat	cytosol	18.79	13.57
TraesCS5D01G394200.1	Wheat	cytosol	19.94	13.37
TraesCS5D01G300900.1	Wheat	nucleus	19.08	9.26
TraesCS1D01G161300.1	Wheat	cytosol	20.52	8.88
TraesCS3D01G313800.1	Wheat	cytosol	20.52	8.57
TraesCS2D01G561900.1	Wheat	cytosol	22.25	8.32
TraesCS1D01G151100.1	Wheat	cytosol	7.23	3.94

Protein Annotations

MapMan:16.4.1.4.3	Gene3D:2.130.10.10	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400	PRINTS:PR00320	ScanProsite:PS00678
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR44006	SMART:SM00320	SUPFAM:SSF50978	EnsemblPlantsGene:TraesCS7D01G486800
EnsemblPlants:TraesCS7D01G486800.1	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf
TIGR:cd00200	:	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:596897632..596898672

Molecular Weight (calculated)

38452.6 Da

IEP (calculated)

7.902

GRAVY (calculated)

-0.488

Length

346 amino acids

Sequence
(BLAST)

001: MYSAPGNNSL ALAAPRPGME LGNVQQHPNQ AFGLGPGGKQ RSSSLEAPIM LLTGHQSAVY CMKFNPAGTV IASGSHDKDI FLWYVHGECK NYMVLRGHKN
101: AILDLHWTTD GSQIISASPD KTLRVWDVET GKQVKKMAEH SSFVNSCCPS RKWPPLVVSG SDDGTAKLWD LRQRGAIQTL PDKFQITAVS FSETADKVFT
201: GGLDNDVKWW DLRKNEVTES LKGHQDMITG MQLSPDGSYL LTNAMDNELK IWDLRPYAPE NRNIKTFTGH QHNFEKTLLK CSWSPDNRKV TAGSADRMVY
301: IWDTTSRRIL YKLPGHNGSV NETAFHPTEP IIGSCGSDKQ IYLGEL

Best Arabidopsis Sequence Match ( AT2G43770.1 )
(BLAST)

001: MEIMSRENET ALSGPRPMEW STVPHSASQG PGPNGKNRTS SLEAPIMLLS GHPSAVYTMK FNPAGTLIAS GSHDREIFLW RVHGDCKNFM VLKGHKNAIL
101: DLHWTSDGSQ IVSASPDKTV RAWDVETGKQ IKKMAEHSSF VNSCCPTRRG PPLIISGSDD GTAKLWDMRQ RGAIQTFPDK YQITAVSFSD AADKIFTGGV
201: DNDVKVWDLR KGEATMTLEG HQDTITGMSL SPDGSYLLTN GMDNKLCVWD MRPYAPQNRC VKIFEGHQHN FEKNLLKCSW SPDGTKVTAG SSDRMVHIWD
301: TTSRRTIYKL PGHTGSVNEC VFHPTEPIIG SCSSDKNIYL GEI

Arabidopsis Description

At2g43770 [Source:UniProtKB/TrEMBL;Acc:O22826]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.