Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011519.1-P | Field mustard | plastid | 81.25 | 84.78 |
| CDX75421 | Canola | plastid | 80.56 | 84.06 |
| CDY69869 | Canola | plastid | 79.86 | 83.94 |
| CDY45303 | Canola | plastid | 81.25 | 82.98 |
| CDX72477 | Canola | plastid | 79.86 | 82.73 |
| Bra017644.1-P | Field mustard | plastid | 79.86 | 81.56 |
| CDX76269 | Canola | cytosol | 49.31 | 80.68 |
| AT2G14880.1 | Thale cress | plastid | 73.61 | 75.18 |
| VIT_03s0091g00430.t01 | Wine grape | plastid | 63.89 | 63.45 |
| PGSC0003DMT400025339 | Potato | plastid | 59.03 | 62.04 |
| Solyc01g107330.2.1 | Tomato | plastid | 61.11 | 60.27 |
| PGSC0003DMT400059663 | Potato | plastid | 57.64 | 60.14 |
| PGSC0003DMT400066526 | Potato | plastid | 60.42 | 60.0 |
| GSMUA_Achr10P... | Banana | plastid | 55.56 | 56.74 |
| KRH77941 | Soybean | nucleus | 48.61 | 50.36 |
| GSMUA_Achr3P30180_001 | Banana | plastid | 47.22 | 48.57 |
| KRH27569 | Soybean | nucleus | 49.31 | 47.97 |
| Bra034617.1-P | Field mustard | cytosol | 27.78 | 47.62 |
| GSMUA_Achr7P26330_001 | Banana | plastid | 45.83 | 47.14 |
| AT2G35605.1 | Thale cress | mitochondrion | 33.33 | 44.04 |
| AT1G31760.1 | Thale cress | mitochondrion | 32.64 | 41.96 |
| HORVU5Hr1G028290.1 | Barley | plastid | 44.44 | 41.83 |
| TraesCS5A01G105100.1 | Wheat | plastid | 44.44 | 41.29 |
| TraesCS5B01G108300.1 | Wheat | plastid | 43.75 | 41.18 |
| TraesCS5D01G115900.1 | Wheat | plastid | 43.75 | 41.18 |
| Zm00001d035321_P001 | Maize | plastid | 38.89 | 39.16 |
| EES17082 | Sorghum | plastid | 38.19 | 37.41 |
| AT3G03590.1 | Thale cress | mitochondrion, plastid | 35.42 | 35.66 |
| Os12t0507500-00 | Rice | plastid | 29.17 | 23.33 |
| AT4G22360.1 | Thale cress | nucleus | 29.86 | 11.17 |
| AT1G49520.1 | Thale cress | nucleus | 23.61 | 9.14 |
| AT3G19080.4 | Thale cress | nucleus | 23.61 | 7.33 |
Protein Annotations
| Gene3D:1.10.245.10 | MapMan:35.2 | EntrezGene:829579 | UniProt:A0A178UX40 | ProteinID:AEE86355.1 | ArrayExpress:AT4G34290 |
| EnsemblPlantsGene:AT4G34290 | RefSeq:AT4G34290 | TAIR:AT4G34290 | RefSeq:AT4G34290-TAIR-G | EnsemblPlants:AT4G34290.1 | TAIR:AT4G34290.1 |
| Unigene:At.2612 | EMBL:BT001198 | ProteinID:CAB36706.1 | ProteinID:CAB80146.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR036885 | RefSeq:NP_195155.1 | ProteinID:OAO98080.1 | PFAM:PF02201 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR13844 | PANTHER:PTHR13844:SF8 |
| UniProt:Q9SYZ4 | SMART:SM00151 | SUPFAM:SSF47592 | InterPro:SWIB_MDM2_dom_sf | InterPro:SWIB_MDM2_domain | InterPro:SWIB_domain |
| UniParc:UPI00000AC40D | SEG:seg | : | : | : | : |
Description
SWIB/MDM2 domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SYZ4]
Coordinates
chr4:+:16410791..16412385
Molecular Weight (calculated)
15999.5 Da
IEP (calculated)
10.478
GRAVY (calculated)
-0.287
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSSGIFST TFLCVDTAPL RSSMLSPSSL RLSPNHPTNL RMVRAVTSAA AASSDPTTTT KTREPRGIMK PRPVSQAMQD VVGVPEIPRT QALKRIWAYI
101: KEHDLQDPQN KRDILCDEKL KKIFEGKERV GFLEIAKLIG PHFL
101: KEHDLQDPQN KRDILCDEKL KKIFEGKERV GFLEIAKLIG PHFL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.