Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY60377 | Canola | nucleus | 93.27 | 95.57 |
| CDX88846 | Canola | nucleus | 93.27 | 95.57 |
| Bra002285.1-P | Field mustard | nucleus | 66.35 | 94.52 |
| CDY45099 | Canola | nucleus | 90.87 | 93.1 |
| Bra020093.1-P | Field mustard | nucleus | 90.38 | 92.61 |
| Bra006549.1-P | Field mustard | nucleus | 92.31 | 92.31 |
| CDY35823 | Canola | nucleus | 65.38 | 88.31 |
| CDX92479 | Canola | nucleus | 64.42 | 87.01 |
| KRH64611 | Soybean | nucleus | 54.33 | 62.43 |
| KRH16433 | Soybean | nucleus | 61.54 | 61.54 |
| KRH53304 | Soybean | nucleus | 53.37 | 61.33 |
| KRH18034 | Soybean | nucleus | 60.58 | 60.58 |
| VIT_18s0001g01760.t01 | Wine grape | nucleus | 61.06 | 59.91 |
| Solyc06g059970.2.1 | Tomato | nucleus | 61.54 | 59.81 |
| GSMUA_Achr5P01230_001 | Banana | nucleus | 56.25 | 55.45 |
| GSMUA_Achr6P18670_001 | Banana | nucleus | 55.77 | 54.98 |
| PGSC0003DMT400019070 | Potato | nucleus | 55.29 | 54.76 |
| EES01864 | Sorghum | nucleus | 53.37 | 53.11 |
| Os01t0883100-01 | Rice | nucleus | 52.88 | 52.63 |
| TraesCS1A01G264300.1 | Wheat | nucleus | 52.4 | 52.4 |
| TraesCS1B01G275000.1 | Wheat | nucleus | 52.4 | 52.4 |
| Zm00001d010232_P001 | Maize | nucleus | 51.92 | 50.94 |
| EES18254 | Sorghum | nucleus | 51.92 | 50.94 |
| TraesCS3D01G401700.1 | Wheat | nucleus | 50.96 | 50.72 |
| TraesCS3A01G406500.2 | Wheat | nucleus | 50.96 | 50.72 |
| Os05t0423400-01 | Rice | nucleus | 52.4 | 50.7 |
| TraesCS3B01G440200.3 | Wheat | nucleus | 50.96 | 49.53 |
| Zm00001d042618_P001 | Maize | nucleus | 53.37 | 49.33 |
| HORVU1Hr1G063620.1 | Barley | nucleus | 52.4 | 48.88 |
| TraesCS1D01G264500.1 | Wheat | nucleus | 46.15 | 44.04 |
| Zm00001d010233_P004 | Maize | nucleus | 50.96 | 41.41 |
| HORVU3Hr1G091000.8 | Barley | nucleus, plastid | 51.44 | 39.19 |
| PGSC0003DMT400019069 | Potato | cytosol | 10.58 | 36.67 |
| AT3G54340.1 | Thale cress | nucleus | 31.25 | 28.02 |
| AT5G23260.4 | Thale cress | nucleus | 36.06 | 27.99 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:832146 | UniProt:A0A178UBJ6 | ProteinID:AAD51984.1 | ProteinID:AAD51985.1 |
| ProteinID:AAD51986.1 | ProteinID:AAD51987.1 | ProteinID:AAD51988.1 | ProteinID:AAD51989.1 | ProteinID:AAD51990.1 | ProteinID:AAD51991.1 |
| ProteinID:AAD51992.1 | ProteinID:AAD51993.1 | ProteinID:AAD51994.1 | ProteinID:AAD51995.1 | ProteinID:AAD51996.1 | ProteinID:AAD51997.1 |
| ProteinID:AAD51998.1 | ProteinID:AAD51999.1 | ProteinID:AED92817.1 | EMBL:AF296825 | ArrayExpress:AT5G20240 | EnsemblPlantsGene:AT5G20240 |
| RefSeq:AT5G20240 | TAIR:AT5G20240 | RefSeq:AT5G20240-TAIR-G | EnsemblPlants:AT5G20240.1 | TAIR:AT5G20240.1 | ProteinID:BAA87000.1 |
| ncoils:Coil | EMBL:D30807 | GO:GO:0000003 | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009791 |
| GO:GO:0009908 | GO:GO:0009987 | GO:GO:0010093 | GO:GO:0030154 | GO:GO:0045944 | GO:GO:0046983 |
| InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 | InterPro:MADS_MEF2-like | RefSeq:NP_197524.1 | ProteinID:OAO90482.1 |
| UniProt:P48007 | PFAM:PF00319 | PFAM:PF01486 | Symbol:PI | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0003022 |
| PO:PO:0004507 | PO:PO:0005421 | PO:PO:0006081 | PO:PO:0007095 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020100 |
| PO:PO:0020149 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 |
| PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF354 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox |
| InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0000131B1B | SEG:seg | : | : |
Description
PIFloral homeotic protein PISTILLATA [Source:UniProtKB/Swiss-Prot;Acc:P48007]
Coordinates
chr5:+:6828904..6831515
Molecular Weight (calculated)
24048.5 Da
IEP (calculated)
9.454
GRAVY (calculated)
-0.591
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGKIEIKR IENANNRVVT FSKRRNGLVK KAKEITVLCD AKVALIIFAS NGKMIDYCCP SMDLGAMLDQ YQKLSGKKLW DAKHENLSNE IDRIKKENDS
101: LQLELRHLKG EDIQSLNLKN LMAVEHAIEH GLDKVRDHQM EILISKRRNE KMMAEEQRQL TFQLQQQEMA IASNARGMMM RDHDGQFGYR VQPIQPNLQE
201: KIMSLVID
101: LQLELRHLKG EDIQSLNLKN LMAVEHAIEH GLDKVRDHQM EILISKRRNE KMMAEEQRQL TFQLQQQEMA IASNARGMMM RDHDGQFGYR VQPIQPNLQE
201: KIMSLVID
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.