Factsheet for Bra003331.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67733	Canola	cytosol	98.16	97.86
Bra007390.1-P	Field mustard	cytosol	34.97	46.34
Bra003329.1-P	Field mustard	cytosol	36.81	40.82
Bra007388.1-P	Field mustard	cytosol	38.04	40.79
Bra014575.1-P	Field mustard	cytosol	36.81	40.27
Bra012666.1-P	Field mustard	cytosol	32.82	39.34
Bra014574.1-P	Field mustard	cytosol	33.74	38.73
Bra007386.1-P	Field mustard	cytosol	37.12	37.12
Bra014577.1-P	Field mustard	cytosol	30.67	36.5
Bra014088.1-P	Field mustard	cytosol	29.45	35.69
Bra014571.1-P	Field mustard	cytosol	20.86	35.6
Bra008697.1-P	Field mustard	plastid	19.33	35.0
Bra007389.1-P	Field mustard	cytosol	34.05	34.8
Bra003328.1-P	Field mustard	cytosol	14.42	34.06
Bra007392.1-P	Field mustard	cytosol	33.74	33.74
Bra003330.1-P	Field mustard	cytosol	48.47	32.99
Bra014573.1-P	Field mustard	cytosol, extracellular, plastid	8.9	27.62
Bra014572.1-P	Field mustard	cytosol	35.58	25.89
Bra007387.1-P	Field mustard	cytosol	34.36	23.78
Bra003337.1-P	Field mustard	nucleus	30.06	16.93
Bra003332.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	34.05	16.54

Protein Annotations

EnsemblPlants:Bra003331.1	EnsemblPlants:Bra003331.1-P	EnsemblPlantsGene:Bra003331	Gene3D:2.60.210.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	InterPro:TRAF-like	PANTHER:PTHR24007
PANTHER:PTHR24007:SF12	PFAM:PF00917	PFscan:PS50144	SEG:seg	SMART:SM00061	SUPFAM:SSF49599
UniParc:UPI0002541636	UniProt:M4CGJ8	MapMan:35.1	:	:	:

Description

AT3G58360 (E=5e-037) | meprin and TRAF homology domain-containing protein / MATH domain-containing protein

Coordinates

chrA07:-:12630304..12633437

Molecular Weight (calculated)

37522.8 Da

IEP (calculated)

6.122

GRAVY (calculated)

-0.392

Length

326 amino acids

Sequence
(BLAST)

001: MEKKVDKKFT WVIKDFSSLQ SEKIFSDKFV VSGCKWYISA YPKGYKVDNF LSLYLEVPDY GSLPSDWRRH ARYRLIVVNQ RSEKLSRQLE VQHWFDVKSS
101: SWGFPSMLSL DEINSKDGGF LVNGELKIAI EIELLEIIGK VEVNGFHLLS SQVEYVSRMF EKHPETASEV HLRNPNIRTE SHRWFDQNNS KWGFPYMIPL
201: AKIHDKNEGF LVNDQLMIVA EVDVLQVVVT SEKPEETNPL NQVESVSSIQ DSVVEFRARN QHLKTACTNV LLSLTQTLCQ TPQELSVDDL VEAGKTLAYM
301: KDSGLEVEWL VKKLNEVKAK KQEQSG

Best Arabidopsis Sequence Match ( AT2G05410.2 )
(BLAST)

001: METTVDTTIT WVIKNFSSLQ SAPIYSDIFV VGGCKWRIMA YPKGINKAHD SFSLFLNVPD NESLPTGWRR HAKVSFSLVN QGSEKLSQRK VTQHWFVQKA
101: FTWGFPVMIT HTELNAKMGF LVNGELKVVA KIEVLEVVGK LDVSKESSPI MKTIDVNGFQ VLPSQVDSVK RLFEKNLDIV SKFRLKNPYL KTACMNLLLS
201: LTETLCQSPQ ELSNDGLSDA GVALAYLIET GLKLDWLEKK LDELKEKKKK EESCLVRLRE MDEQLQPFKK RCLDIEDQIS KEKEELLAAR EPLSLYDDID
301: NNV

Arabidopsis Description

MATH domain and coiled-coil domain-containing protein At2g05410 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHT3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.