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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY52912 Canola cytosol 95.77 91.28
Bra014575.1-P Field mustard cytosol 83.1 79.19
AT3G58360.1 Thale cress cytosol 69.01 65.77
Bra003328.1-P Field mustard cytosol 28.87 59.42
Bra014573.1-P Field mustard cytosol, extracellular, plastid 19.01 51.43
Bra003329.1-P Field mustard cytosol 52.11 50.34
Bra014571.1-P Field mustard cytosol 32.39 48.17
Bra008697.1-P Field mustard plastid 30.28 47.78
Bra014577.1-P Field mustard cytosol 45.07 46.72
Bra014088.1-P Field mustard cytosol 42.96 45.35
Bra007388.1-P Field mustard cytosol 47.18 44.08
Bra007390.1-P Field mustard cytosol 36.62 42.28
Bra012666.1-P Field mustard cytosol 39.08 40.81
Bra007386.1-P Field mustard cytosol 46.48 40.49
Bra007392.1-P Field mustard cytosol 44.01 38.34
Bra007389.1-P Field mustard cytosol 42.61 37.93
Bra003330.1-P Field mustard cytosol 58.1 34.45
Bra003331.1-P Field mustard cytosol 38.73 33.74
Bra014572.1-P Field mustard cytosol 52.11 33.04
Bra007387.1-P Field mustard cytosol 46.13 27.81
Bra003332.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 44.01 18.63
Bra003337.1-P Field mustard nucleus 37.68 18.48
Protein Annotations
EnsemblPlants:Bra014574.1EnsemblPlants:Bra014574.1-PEnsemblPlantsGene:Bra014574Gene3D:2.60.210.10GO:GO:0003674GO:GO:0005488
GO:GO:0005515InterPro:IPR002083InterPro:IPR008974InterPro:MATH/TRAF_domInterPro:TRAF-likencoils:Coil
PANTHER:PTHR24007PANTHER:PTHR24007:SF12PFAM:PF00917PFscan:PS50144SEG:segSMART:SM00061
SUPFAM:SSF49599UniParc:UPI00025441CFUniProt:M4DDK6MapMan:35.1::
Description
AT3G58360 (E=5e-064) | meprin and TRAF homology domain-containing protein / MATH domain-containing protein
Coordinates
chrA04:+:1528248..1529917
Molecular Weight (calculated)
32454.8 Da
IEP (calculated)
4.824
GRAVY (calculated)
-0.419
Length
284 amino acids
Sequence
(BLAST)
001: MGEHSMKKIT WTIKNFSSLQ REKICSDPFV VGRCEWRLCA YPKGNNVDYL FLFLEVADHE SLPCGWRRNV RFSLNEQKWF GEESPRWGRV SMFPLNEIHA
101: KESGYLVNGE LKIVAEIEVI AAIGKLDIAE ETSTIIETMD VNGFQLFPSQ LELVSRLLER HPEIASDIRT KNPNLRTGYM SLLLSLIETL RQSPHELSKT
201: DLAEADAALG SMTNAGFKLD WLEKKLDDMA EKKEKEEAGE ARVREIEEEL KDLNQKCSNL EAQLEKQKLE LSAAKAPISF DDVF
Best Arabidopsis Sequence Match ( AT3G58360.1 )
(BLAST)
001: MGKQLAKKIT WAIENFSSLH SKKIYSDPFI VGGCKWRFLV YPKGNNVDYL FLYLEVADYE SLSPEWRRHA RYLLNVVNQN SVKRSKQNEE QKWFDVQSPR
101: WGRLSMFPLN EINAKDSGFL VNGELKIVAE IEVLEVIGKL DVSEETSTIM ESMDFNGFQL LPSQVDFVRH MFEKHPEIAS EFRLKNPNLR AGYMSLLLSL
201: IETLRQSPQE LNKVDLAEGY VALRSITDAG FKVDWLEKKL VEISEKKNKE EAGETRMQEI NEELESLKQK CLDLEAQLEK EKAEVFAAKS PLSFNDVF
Arabidopsis Description
MATH domain and coiled-coil domain-containing protein At3g58360 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2I0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.