Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY52912 | Canola | cytosol | 95.77 | 91.28 |
Bra014575.1-P | Field mustard | cytosol | 83.1 | 79.19 |
AT3G58360.1 | Thale cress | cytosol | 69.01 | 65.77 |
Bra003328.1-P | Field mustard | cytosol | 28.87 | 59.42 |
Bra014573.1-P | Field mustard | cytosol, extracellular, plastid | 19.01 | 51.43 |
Bra003329.1-P | Field mustard | cytosol | 52.11 | 50.34 |
Bra014571.1-P | Field mustard | cytosol | 32.39 | 48.17 |
Bra008697.1-P | Field mustard | plastid | 30.28 | 47.78 |
Bra014577.1-P | Field mustard | cytosol | 45.07 | 46.72 |
Bra014088.1-P | Field mustard | cytosol | 42.96 | 45.35 |
Bra007388.1-P | Field mustard | cytosol | 47.18 | 44.08 |
Bra007390.1-P | Field mustard | cytosol | 36.62 | 42.28 |
Bra012666.1-P | Field mustard | cytosol | 39.08 | 40.81 |
Bra007386.1-P | Field mustard | cytosol | 46.48 | 40.49 |
Bra007392.1-P | Field mustard | cytosol | 44.01 | 38.34 |
Bra007389.1-P | Field mustard | cytosol | 42.61 | 37.93 |
Bra003330.1-P | Field mustard | cytosol | 58.1 | 34.45 |
Bra003331.1-P | Field mustard | cytosol | 38.73 | 33.74 |
Bra014572.1-P | Field mustard | cytosol | 52.11 | 33.04 |
Bra007387.1-P | Field mustard | cytosol | 46.13 | 27.81 |
Bra003332.1-P | Field mustard | endoplasmic reticulum, golgi, plasma membrane | 44.01 | 18.63 |
Bra003337.1-P | Field mustard | nucleus | 37.68 | 18.48 |
Protein Annotations
EnsemblPlants:Bra014574.1 | EnsemblPlants:Bra014574.1-P | EnsemblPlantsGene:Bra014574 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005515 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | ncoils:Coil |
PANTHER:PTHR24007 | PANTHER:PTHR24007:SF12 | PFAM:PF00917 | PFscan:PS50144 | SEG:seg | SMART:SM00061 |
SUPFAM:SSF49599 | UniParc:UPI00025441CF | UniProt:M4DDK6 | MapMan:35.1 | : | : |
Description
AT3G58360 (E=5e-064) | meprin and TRAF homology domain-containing protein / MATH domain-containing protein
Coordinates
chrA04:+:1528248..1529917
Molecular Weight (calculated)
32454.8 Da
IEP (calculated)
4.824
GRAVY (calculated)
-0.419
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEHSMKKIT WTIKNFSSLQ REKICSDPFV VGRCEWRLCA YPKGNNVDYL FLFLEVADHE SLPCGWRRNV RFSLNEQKWF GEESPRWGRV SMFPLNEIHA
101: KESGYLVNGE LKIVAEIEVI AAIGKLDIAE ETSTIIETMD VNGFQLFPSQ LELVSRLLER HPEIASDIRT KNPNLRTGYM SLLLSLIETL RQSPHELSKT
201: DLAEADAALG SMTNAGFKLD WLEKKLDDMA EKKEKEEAGE ARVREIEEEL KDLNQKCSNL EAQLEKQKLE LSAAKAPISF DDVF
101: KESGYLVNGE LKIVAEIEVI AAIGKLDIAE ETSTIIETMD VNGFQLFPSQ LELVSRLLER HPEIASDIRT KNPNLRTGYM SLLLSLIETL RQSPHELSKT
201: DLAEADAALG SMTNAGFKLD WLEKKLDDMA EKKEKEEAGE ARVREIEEEL KDLNQKCSNL EAQLEKQKLE LSAAKAPISF DDVF
001: MGKQLAKKIT WAIENFSSLH SKKIYSDPFI VGGCKWRFLV YPKGNNVDYL FLYLEVADYE SLSPEWRRHA RYLLNVVNQN SVKRSKQNEE QKWFDVQSPR
101: WGRLSMFPLN EINAKDSGFL VNGELKIVAE IEVLEVIGKL DVSEETSTIM ESMDFNGFQL LPSQVDFVRH MFEKHPEIAS EFRLKNPNLR AGYMSLLLSL
201: IETLRQSPQE LNKVDLAEGY VALRSITDAG FKVDWLEKKL VEISEKKNKE EAGETRMQEI NEELESLKQK CLDLEAQLEK EKAEVFAAKS PLSFNDVF
101: WGRLSMFPLN EINAKDSGFL VNGELKIVAE IEVLEVIGKL DVSEETSTIM ESMDFNGFQL LPSQVDFVRH MFEKHPEIAS EFRLKNPNLR AGYMSLLLSL
201: IETLRQSPQE LNKVDLAEGY VALRSITDAG FKVDWLEKKL VEISEKKNKE EAGETRMQEI NEELESLKQK CLDLEAQLEK EKAEVFAAKS PLSFNDVF
Arabidopsis Description
MATH domain and coiled-coil domain-containing protein At3g58360 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2I0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.