Factsheet for Bra003328.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014573.1-P	Field mustard	cytosol, extracellular, plastid	34.06	44.76
Bra008697.1-P	Field mustard	plastid	55.8	42.78
Bra003329.1-P	Field mustard	cytosol	83.33	39.12
Bra014571.1-P	Field mustard	cytosol	50.72	36.65
AT3G58270.3	Thale cress	cytosol	76.09	30.61
Bra014574.1-P	Field mustard	cytosol	59.42	28.87
Bra014575.1-P	Field mustard	cytosol	56.52	26.17
Bra014577.1-P	Field mustard	cytosol	48.55	24.45
CDX98278	Canola	cytosol	38.41	24.2
Bra007389.1-P	Field mustard	cytosol	52.17	22.57
Bra007386.1-P	Field mustard	cytosol	50.0	21.17
Bra007388.1-P	Field mustard	cytosol	46.38	21.05
Bra012666.1-P	Field mustard	cytosol	41.3	20.96
Bra007392.1-P	Field mustard	cytosol	44.2	18.71
Bra014088.1-P	Field mustard	cytosol	34.78	17.84
Bra003330.1-P	Field mustard	cytosol	57.97	16.7
Bra014572.1-P	Field mustard	cytosol	52.9	16.29
Bra007390.1-P	Field mustard	cytosol	28.99	16.26
Bra003331.1-P	Field mustard	cytosol	34.06	14.42
Bra007387.1-P	Field mustard	cytosol	47.83	14.01
Bra003332.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	51.45	10.58
Bra003337.1-P	Field mustard	nucleus	38.41	9.15

Protein Annotations

EnsemblPlants:Bra003328.1	EnsemblPlants:Bra003328.1-P	EnsemblPlantsGene:Bra003328	Gene3D:1.20.1270.60	InterPro:AH/BAR_dom_sf	InterPro:IPR027267
InterPro:PLipase-like	ncoils:Coil	PANTHER:PTHR24007	PANTHER:PTHR24007:SF12	PFAM:PF05278	SEG:seg
SUPFAM:SSF103657	UniParc:UPI0002541633	UniProt:M4CGJ5	MapMan:35.1	:	:

Description

AT3G58270 (E=2e-043) | meprin and TRAF homology domain-containing protein / MATH domain-containing protein

Coordinates

chrA07:-:12618292..12619198

Molecular Weight (calculated)

15841.8 Da

IEP (calculated)

4.605

GRAVY (calculated)

-0.625

Length

138 amino acids

Sequence
(BLAST)

001: MTQVAESLSL IFERHPDIAS KFRPKNQHLR TAYINVLLSL IKTLCQPTQE LSKDDLNDAY ASLAYLTNAG LNLDWLEEKL EEMSEKKDKQ KAGEERMKEI
101: EEELKDLKQK FSNLEAELEK EKADVSVARA PLSFDDVV

Best Arabidopsis Sequence Match ( AT3G58270.1 )
(BLAST)

001: MGKEVDNKFT WVIKNFSSQQ SRKNYSDEFF VDGCKWRLLA FPKGNGVEKL SLYLAVAGSE FLPDGWRRHA YFHFSVVNQL SDELSQARET KNWFDASTSD
101: WGFTSMLSLK KLHDKDGGFL VNGELKIVVD VSVLEVIGKL DVPVESEETT TKALSELEEN DVPEESEETT KALSKVDEND GAESNDSLKE ASSVKESMDV
201: NGFRVLPSQV ETVSCIFERH PDIASEFGPK NQHLRSAYMN VLLSLIKTMC QSTQELSKDD LSDADAALAY LTDAGLNLNW LEEKLEEVSE KKENEEAGET
301: RVHEIEEELK ELKLKCSNLE AQLEKEKADV SVARAPFSFD DIV

Arabidopsis Description

MATH domain and coiled-coil domain-containing protein At3g58270 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2I9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.