Factsheet for Bra014577.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88978	Canola	cytosol	100.0	100.0
Bra003328.1-P	Field mustard	cytosol	24.45	48.55
AT3G58260.1	Thale cress	cytosol, golgi, mitochondrion, plastid	55.84	47.66
Bra014575.1-P	Field mustard	cytosol	50.73	46.64
Bra014574.1-P	Field mustard	cytosol	46.72	45.07
Bra014573.1-P	Field mustard	cytosol, extracellular, plastid	16.79	43.81
Bra003329.1-P	Field mustard	cytosol	43.43	40.48
Bra007388.1-P	Field mustard	cytosol	44.16	39.8
Bra014571.1-P	Field mustard	cytosol	27.74	39.79
Bra008697.1-P	Field mustard	plastid	25.91	39.44
Bra007386.1-P	Field mustard	cytosol	45.62	38.34
Bra007390.1-P	Field mustard	cytosol	33.94	37.8
Bra012666.1-P	Field mustard	cytosol	36.5	36.76
Bra014088.1-P	Field mustard	cytosol	35.04	35.69
Bra007389.1-P	Field mustard	cytosol	41.24	35.42
Bra007392.1-P	Field mustard	cytosol	40.15	33.74
Bra003331.1-P	Field mustard	cytosol	36.5	30.67
Bra014572.1-P	Field mustard	cytosol	45.26	27.68
Bra003330.1-P	Field mustard	cytosol	45.26	25.89
Bra007387.1-P	Field mustard	cytosol	42.34	24.63
Bra003332.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	43.43	17.73
Bra003337.1-P	Field mustard	nucleus	34.67	16.41

Protein Annotations

EnsemblPlants:Bra014577.1	EnsemblPlants:Bra014577.1-P	EnsemblPlantsGene:Bra014577	Gene3D:2.60.210.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	InterPro:TRAF-like	ncoils:Coil
PANTHER:PTHR24007	PANTHER:PTHR24007:SF12	PFscan:PS50144	SEG:seg	SUPFAM:SSF49599	UniParc:UPI00025441D2
UniProt:M4DDK9	MapMan:35.1	:	:	:	:

Description

AT3G58260 (E=1e-053) | meprin and TRAF homology domain-containing protein / MATH domain-containing protein

Coordinates

chrA04:+:1540419..1541590

Molecular Weight (calculated)

31190.0 Da

IEP (calculated)

9.628

GRAVY (calculated)

-0.215

Length

274 amino acids

Sequence
(BLAST)

001: MGSQVDSKFT WVIKNLAPFG SQIIYSDSFV ISGCKWRLIA YPKSKLLNYL TLEVADSESF PIGWRRLANF SVTILNKALK QIYRRQVTQQ WFDHKTPRLS
101: FPLMKTTLGF LVDEEVKIVA EIDVEVIING FEVLPSQVKS VNRLFKRQPD IASKFPINNP LLKTSYMNVL LSLTRALHLS PQKISNGDLS DTETTLAHMK
201: SIGFKLDWLE KKLGEIKEKK AKEKAGKIKI QNTEEKLKDL KQKCLDLEAQ LETEKAEVLA ASAPLLLSDD EDVF

Best Arabidopsis Sequence Match ( AT3G58260.1 )
(BLAST)

001: MGKQINNTFT WVIKNLSTLQ GLEVRSKIFV VGGCKWRLIA YPEVNDADGY LSLSVYLGVP DCCESLPSGW KRHAKFSLTI VNQLSEGLSQ VQETQAWFDE
101: NAPGWGFPPM LNLKDVSDKY GGFLVNDEVM VAVAVDVIEV VGSLDAPEMS ESMDIKGFKV LPSQVKSVNR LFESHPDIAS KFSIKNQSLK TAYMNVLLCL
201: AETLHQSPME ISEDDLSDAK TTLAYMKSVG FKLDWLEKKL DELFEKKKEE ADKIRMQNIE EELKDLRQKC SSLEALLKKE KTGVLAAKAP FLFFNNVNDD
301: DLKWILRAVM YTLIMMLFIS I

Arabidopsis Description

MATH domain and coiled-coil domain-containing protein At3g58260 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2J0]
SUBAcon: [mitochondrion,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.