Factsheet for Bra014573.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	extracellular
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88981	Canola	extracellular	99.05	47.93
Bra014571.1-P	Field mustard	cytosol	64.76	35.6
Bra003328.1-P	Field mustard	cytosol	44.76	34.06
Bra008697.1-P	Field mustard	plastid	50.48	29.44
Bra007392.1-P	Field mustard	cytosol	59.05	19.02
Bra014574.1-P	Field mustard	cytosol	51.43	19.01
Bra014575.1-P	Field mustard	cytosol	48.57	17.11
Bra014088.1-P	Field mustard	cytosol	43.81	17.1
Bra014577.1-P	Field mustard	cytosol	43.81	16.79
Bra012666.1-P	Field mustard	cytosol	42.86	16.54
Bra007388.1-P	Field mustard	cytosol	45.71	15.79
Bra007386.1-P	Field mustard	cytosol	48.57	15.64
Bra007390.1-P	Field mustard	cytosol	36.19	15.45
Bra007389.1-P	Field mustard	cytosol	46.67	15.36
Bra003329.1-P	Field mustard	cytosol	42.86	15.31
Bra014572.1-P	Field mustard	cytosol	60.95	14.29
Bra003330.1-P	Field mustard	cytosol	51.43	11.27
Bra007387.1-P	Field mustard	cytosol	47.62	10.62
Bra003331.1-P	Field mustard	cytosol	27.62	8.9
Bra003332.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	41.9	6.56
Bra003337.1-P	Field mustard	nucleus	29.52	5.35

Protein Annotations

EnsemblPlants:Bra014573.1	EnsemblPlants:Bra014573.1-P	EnsemblPlantsGene:Bra014573	ncoils:Coil	UniParc:UPI00025441CE	UniProt:M4DDK5
MapMan:35.1	:	:	:	:	:

Description

AT3G58410 (E=3e-035) | meprin and TRAF homology domain-containing protein / MATH domain-containing protein

Coordinates

chrA04:+:1526436..1526753

Molecular Weight (calculated)

11988.5 Da

IEP (calculated)

4.575

GRAVY (calculated)

-0.405

Length

105 amino acids

Sequence
(BLAST)

001: MSSLLGLIQT LCKSLQELSN EDLIEADIAL KYVKDAGFKV DWLEKNLDQV KEKKLKELSG LAMLQETEEK ALRLKRKFEE LDALAEEQKK ELSATRTSLT
101: FDDVV

Best Arabidopsis Sequence Match ( AT3G58410.2 )
(BLAST)

001: MTKQVGKKFA WVIKNFSSLQ CKKFYSVPFQ IGDCKWRLSI YPKGNNCDYL SLFLEVADFK SLPSGWRRYV KLRLYIVKQL STLIRKTHRW FDQEMWGWGF
101: LYMLPLTKLH DEKEGFLVNG ELMIVAEVDA LGFIDPLNES EESEDPTQPL KKIKLNDDGA VSSDLLEEAS PRKESMEVNG FQVLPSQVES VRLIFERHPD
201: IASEFRAKNQ YLRKACMDFL LSLVETLCQS LQEFSNEDLV EADIALTYLK DAGFKVDWLE KKLDQVRDKK EKERSCLAKL QETEETLLKL KQKCTELDAL
301: MDTEKAELSA IRTPLSFEDV V

Arabidopsis Description

TRAF-like family protein [Source:TAIR;Acc:AT3G58410]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.