Factsheet for Bra014575.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014574.1-P	Field mustard	cytosol	79.19	83.1
AT3G58360.1	Thale cress	cytosol	68.12	68.12
Bra003328.1-P	Field mustard	cytosol	26.17	56.52
Bra014577.1-P	Field mustard	cytosol	46.64	50.73
Bra003329.1-P	Field mustard	cytosol	50.0	50.68
Bra014571.1-P	Field mustard	cytosol	32.21	50.26
Bra014573.1-P	Field mustard	cytosol, extracellular, plastid	17.11	48.57
Bra014088.1-P	Field mustard	cytosol	43.29	47.96
Bra008697.1-P	Field mustard	plastid	27.85	46.11
Bra007390.1-P	Field mustard	cytosol	37.58	45.53
Bra007388.1-P	Field mustard	cytosol	45.64	44.74
Bra012666.1-P	Field mustard	cytosol	38.59	42.28
Bra007386.1-P	Field mustard	cytosol	44.97	41.1
Bra007392.1-P	Field mustard	cytosol	42.28	38.65
Bra007389.1-P	Field mustard	cytosol	40.27	37.62
Bra003331.1-P	Field mustard	cytosol	40.27	36.81
Bra003330.1-P	Field mustard	cytosol	56.71	35.28
Bra014572.1-P	Field mustard	cytosol	50.0	33.26
Bra007387.1-P	Field mustard	cytosol	43.62	27.6
Bra003332.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	42.95	19.08
Bra003337.1-P	Field mustard	nucleus	35.23	18.13

Protein Annotations

Gene3D:2.60.210.10	MapMan:35.1	EnsemblPlantsGene:Bra014575	EnsemblPlants:Bra014575.1	EnsemblPlants:Bra014575.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR002083	InterPro:IPR008974	UniProt:M4DDK7
InterPro:MATH/TRAF_dom	PFAM:PF00917	PFAM:PF05278	InterPro:PLipase-like	PFscan:PS50144	PANTHER:PTHR24007
PANTHER:PTHR24007:SF12	SMART:SM00061	SUPFAM:SSF49599	InterPro:TRAF-like	UniParc:UPI00025441D0	SEG:seg

Description

AT3G58360 (E=7e-098) | meprin and TRAF homology domain-containing protein / MATH domain-containing protein

Coordinates

chrA04:+:1531533..1533070

Molecular Weight (calculated)

34497.3 Da

IEP (calculated)

5.362

GRAVY (calculated)

-0.555

Length

298 amino acids

Sequence
(BLAST)

001: MEKQSRKKIT WTIKNFSSLQ CQKLCSDPFV VARCKWRLCT YPKGKNVDYL FLFLEVADHD SLPCGWRRNA RYSLTIVNQN SVKRYRQNDE QKWFDEKTPR
101: RGRVSMFPLN EIHAKESGYL VNGELKIVAE IEVIEVLGKF DVTEETSTIT ETMDVNGFQL LPSQMELVSR LLKRHPDIAS DFSTKNPNLR TGYMSLLLSL
201: IETLRQSPHQ LSYTDLVEAD AALESMTNAG FKLDWLEKKV DEMAEKKEKE EGGEIRVREI EEELKDLKQK CSDLEVQLEK EKLELSAANA PISFDDVM

Best Arabidopsis Sequence Match ( AT3G58360.1 )
(BLAST)

001: MGKQLAKKIT WAIENFSSLH SKKIYSDPFI VGGCKWRFLV YPKGNNVDYL FLYLEVADYE SLSPEWRRHA RYLLNVVNQN SVKRSKQNEE QKWFDVQSPR
101: WGRLSMFPLN EINAKDSGFL VNGELKIVAE IEVLEVIGKL DVSEETSTIM ESMDFNGFQL LPSQVDFVRH MFEKHPEIAS EFRLKNPNLR AGYMSLLLSL
201: IETLRQSPQE LNKVDLAEGY VALRSITDAG FKVDWLEKKL VEISEKKNKE EAGETRMQEI NEELESLKQK CLDLEAQLEK EKAEVFAAKS PLSFNDVF

Arabidopsis Description

MATH domain and coiled-coil domain-containing protein At3g58360 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2I0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.