Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014574.1-P | Field mustard | cytosol | 65.77 | 69.01 |
| Bra014575.1-P | Field mustard | cytosol | 68.12 | 68.12 |
| CDY52912 | Canola | cytosol | 67.79 | 67.79 |
| AT3G58350.1 | Thale cress | cytosol | 64.43 | 63.79 |
| AT3G58400.1 | Thale cress | extracellular | 58.39 | 59.39 |
| AT3G58210.1 | Thale cress | plastid | 58.72 | 53.03 |
| AT2G05410.2 | Thale cress | cytosol | 53.69 | 52.81 |
| AT3G58250.1 | Thale cress | cytosol | 56.04 | 52.68 |
| CDX98283 | Canola | mitochondrion | 69.8 | 52.26 |
| AT2G05400.3 | Thale cress | cytosol | 37.58 | 51.61 |
| AT1G31380.1 | Thale cress | cytosol | 30.2 | 51.43 |
| AT3G58370.1 | Thale cress | cytosol | 51.01 | 50.33 |
| AT1G31390.1 | Thale cress | cytosol | 44.3 | 49.25 |
| AT3G58270.3 | Thale cress | cytosol | 56.38 | 48.98 |
| AT2G05420.1 | Thale cress | cytosol | 48.66 | 48.82 |
| AT3G27040.1 | Thale cress | cytosol | 43.96 | 48.34 |
| AT2G01790.1 | Thale cress | cytosol | 43.29 | 47.96 |
| AT3G44790.1 | Thale cress | cytosol | 51.68 | 47.53 |
| AT3G58410.1 | Thale cress | cytosol | 51.01 | 46.34 |
| AT1G31400.1 | Thale cress | cytosol | 42.95 | 46.04 |
| AT3G58200.1 | Thale cress | cytosol | 48.99 | 45.77 |
| AT3G58340.1 | Thale cress | cytosol | 49.66 | 45.54 |
| AT3G58260.1 | Thale cress | cytosol, golgi, mitochondrion, plastid | 47.65 | 44.24 |
| AT3G44800.1 | Thale cress | cytosol | 50.34 | 43.86 |
| AT1G31370.1 | Thale cress | cytosol | 27.18 | 41.97 |
| AT3G29580.1 | Thale cress | cytosol | 42.95 | 41.83 |
| AT3G58380.1 | Thale cress | cytosol | 42.95 | 41.69 |
| AT3G58240.1 | Thale cress | cytosol | 42.62 | 40.06 |
| AT3G58320.1 | Thale cress | nucleus | 27.85 | 37.05 |
| AT3G44805.1 | Thale cress | cytosol | 29.19 | 35.08 |
| CDX88980 | Canola | cytosol | 66.44 | 33.0 |
| CDY00558 | Canola | cytosol | 66.44 | 33.0 |
| AT3G58220.2 | Thale cress | cytosol | 46.64 | 30.68 |
| AT3G58430.1 | Thale cress | cytosol | 44.3 | 28.03 |
| AT3G58440.1 | Thale cress | cytosol | 42.62 | 21.13 |
Protein Annotations
| Gene3D:2.60.210.10 | MapMan:35.1 | EntrezGene:825005 | ProteinID:AEE79773.1 | ArrayExpress:AT3G58360 | EnsemblPlantsGene:AT3G58360 |
| RefSeq:AT3G58360 | TAIR:AT3G58360 | RefSeq:AT3G58360-TAIR-G | EnsemblPlants:AT3G58360.1 | TAIR:AT3G58360.1 | Unigene:At.53988 |
| ProteinID:CAB68174.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 |
| InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | RefSeq:NP_191395.1 | PFAM:PF00917 | PFscan:PS50144 |
| PANTHER:PTHR24007 | PANTHER:PTHR24007:SF12 | UniProt:Q9M2I0 | SMART:SM00061 | SUPFAM:SSF49599 | InterPro:TRAF-like |
| UniParc:UPI00000A4A15 | : | : | : | : | : |
Description
MATH domain and coiled-coil domain-containing protein At3g58360 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2I0]
Coordinates
chr3:-:21593505..21594866
Molecular Weight (calculated)
34498.3 Da
IEP (calculated)
5.194
GRAVY (calculated)
-0.426
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKQLAKKIT WAIENFSSLH SKKIYSDPFI VGGCKWRFLV YPKGNNVDYL FLYLEVADYE SLSPEWRRHA RYLLNVVNQN SVKRSKQNEE QKWFDVQSPR
101: WGRLSMFPLN EINAKDSGFL VNGELKIVAE IEVLEVIGKL DVSEETSTIM ESMDFNGFQL LPSQVDFVRH MFEKHPEIAS EFRLKNPNLR AGYMSLLLSL
201: IETLRQSPQE LNKVDLAEGY VALRSITDAG FKVDWLEKKL VEISEKKNKE EAGETRMQEI NEELESLKQK CLDLEAQLEK EKAEVFAAKS PLSFNDVF
101: WGRLSMFPLN EINAKDSGFL VNGELKIVAE IEVLEVIGKL DVSEETSTIM ESMDFNGFQL LPSQVDFVRH MFEKHPEIAS EFRLKNPNLR AGYMSLLLSL
201: IETLRQSPQE LNKVDLAEGY VALRSITDAG FKVDWLEKKL VEISEKKNKE EAGETRMQEI NEELESLKQK CLDLEAQLEK EKAEVFAAKS PLSFNDVF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.