Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06044 | Canola | cytosol | 43.69 | 57.72 |
| Bra007390.1-P | Field mustard | cytosol | 43.38 | 57.32 |
| AT3G58410.1 | Thale cress | cytosol | 55.08 | 54.57 |
| CDY00562 | Canola | cytosol | 37.54 | 51.26 |
| AT3G58210.1 | Thale cress | plastid | 51.69 | 50.91 |
| AT3G58360.1 | Thale cress | cytosol | 45.54 | 49.66 |
| AT3G58200.1 | Thale cress | cytosol | 48.62 | 49.53 |
| CDX88983 | Canola | cytosol | 41.85 | 49.1 |
| AT3G44790.1 | Thale cress | cytosol | 48.92 | 49.07 |
| AT3G58370.1 | Thale cress | cytosol | 45.54 | 49.01 |
| AT2G05400.3 | Thale cress | cytosol | 32.62 | 48.85 |
| AT1G31390.1 | Thale cress | cytosol | 39.38 | 47.76 |
| AT2G05420.1 | Thale cress | cytosol | 43.38 | 47.47 |
| AT2G05410.2 | Thale cress | cytosol | 43.38 | 46.53 |
| AT3G58350.1 | Thale cress | cytosol | 43.08 | 46.51 |
| AT3G58270.3 | Thale cress | cytosol | 48.92 | 46.36 |
| AT3G58400.1 | Thale cress | extracellular | 41.54 | 46.08 |
| AT3G27040.1 | Thale cress | cytosol | 38.15 | 45.76 |
| AT1G31400.1 | Thale cress | cytosol | 39.08 | 45.68 |
| AT2G01790.1 | Thale cress | cytosol | 37.23 | 44.98 |
| AT3G44800.1 | Thale cress | cytosol | 47.08 | 44.74 |
| AT3G58260.1 | Thale cress | cytosol, golgi, mitochondrion, plastid | 44.0 | 44.55 |
| AT3G58250.1 | Thale cress | cytosol | 43.08 | 44.16 |
| AT1G31380.1 | Thale cress | cytosol | 23.38 | 43.43 |
| AT3G58380.1 | Thale cress | cytosol | 40.0 | 42.35 |
| AT3G29580.1 | Thale cress | cytosol | 38.77 | 41.18 |
| AT1G31370.1 | Thale cress | cytosol | 24.0 | 40.41 |
| AT3G58240.1 | Thale cress | cytosol | 36.0 | 36.91 |
| AT3G58320.1 | Thale cress | nucleus | 24.62 | 35.71 |
| AT3G44805.1 | Thale cress | cytosol | 26.46 | 34.68 |
| AT3G58430.1 | Thale cress | cytosol | 47.69 | 32.91 |
| AT3G58220.2 | Thale cress | cytosol | 43.38 | 31.13 |
| AT3G58440.1 | Thale cress | cytosol | 44.92 | 24.29 |
| CDX71959 | Canola | cytosol | 44.0 | 23.48 |
Protein Annotations
| Gene3D:2.60.210.10 | MapMan:35.1 | EntrezGene:825003 | ProteinID:AEE79771.1 | ArrayExpress:AT3G58340 | EnsemblPlantsGene:AT3G58340 |
| RefSeq:AT3G58340 | TAIR:AT3G58340 | RefSeq:AT3G58340-TAIR-G | EnsemblPlants:AT3G58340.1 | TAIR:AT3G58340.1 | Unigene:At.53986 |
| ProteinID:CAB68172.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 |
| InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | RefSeq:NP_191393.1 | PFAM:PF00917 | PFscan:PS50144 |
| PANTHER:PTHR24007 | PANTHER:PTHR24007:SF12 | UniProt:Q9M2I2 | SMART:SM00061 | SUPFAM:SSF49599 | InterPro:TRAF-like |
| UniParc:UPI00000A15B4 | SEG:seg | : | : | : | : |
Description
MATH domain and coiled-coil domain-containing protein At3g58340 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2I2]
Coordinates
chr3:-:21589071..21590401
Molecular Weight (calculated)
37280.0 Da
IEP (calculated)
5.511
GRAVY (calculated)
-0.275
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKAVDKKFC WEIKNFSSLN SERCHSVPVV IGDCKWRLVA FPKGYKADYL SLYLEVADFK SLPSGWRRYV KFRACIVNQL SQELSVQQET QRWFDQNAPG
101: WGFENMLLLT ELNAKDGGFL VNGQVMIVAE VEFLEVIGTL DESEEIIKSS DLINKTQEVA QQVKEIIQPN DLINKTQEVA QQVKESIDVN GFQVLPSQVE
201: SVRRIFKKHP DIAVGFQVKN QHLRKTFMNF LVNVIETMCQ SLQELSNEDL VEVDIALTYL KDAGFKVDWL EKKLDHVKEK KEKEQSGLII LQGIEQQLHE
301: LMHKCEKKKS EVLSVGAPLK FDDVV
101: WGFENMLLLT ELNAKDGGFL VNGQVMIVAE VEFLEVIGTL DESEEIIKSS DLINKTQEVA QQVKEIIQPN DLINKTQEVA QQVKESIDVN GFQVLPSQVE
201: SVRRIFKKHP DIAVGFQVKN QHLRKTFMNF LVNVIETMCQ SLQELSNEDL VEVDIALTYL KDAGFKVDWL EKKLDHVKEK KEKEQSGLII LQGIEQQLHE
301: LMHKCEKKKS EVLSVGAPLK FDDVV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.