Factsheet for AT3G58260.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 2
plastid 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00554	Canola	cytosol	47.98	56.0
CDX88978	Canola	cytosol	47.66	55.84
Bra014577.1-P	Field mustard	cytosol	47.66	55.84
AT2G05400.3	Thale cress	cytosol	33.96	50.23
AT1G31390.1	Thale cress	cytosol	41.74	50.0
AT2G05410.2	Thale cress	cytosol	47.04	49.84
AT2G01790.1	Thale cress	cytosol	41.74	49.81
AT3G58350.1	Thale cress	cytosol	45.79	48.84
AT3G58250.1	Thale cress	cytosol	47.98	48.58
AT2G05420.1	Thale cress	cytosol	44.55	48.15
AT3G58370.1	Thale cress	cytosol	45.17	48.01
AT3G58360.1	Thale cress	cytosol	44.24	47.65
AT1G31380.1	Thale cress	cytosol	25.86	47.43
AT3G58270.3	Thale cress	cytosol	50.16	46.94
AT3G27040.1	Thale cress	cytosol	39.25	46.49
AT3G58400.1	Thale cress	extracellular	42.37	46.42
AT1G31400.1	Thale cress	cytosol	39.88	46.04
AT3G58210.1	Thale cress	plastid	47.04	45.76
AT3G44790.1	Thale cress	cytosol	46.11	45.68
AT3G58200.1	Thale cress	cytosol	45.17	45.45
AT3G58340.1	Thale cress	cytosol	44.55	44.0
AT3G44800.1	Thale cress	cytosol	45.17	42.4
AT3G29580.1	Thale cress	cytosol	38.63	40.52
AT3G58410.1	Thale cress	cytosol	41.12	40.24
AT3G58380.1	Thale cress	cytosol	37.69	39.41
AT1G31370.1	Thale cress	cytosol	23.05	38.34
AT3G58320.1	Thale cress	nucleus	26.17	37.5
AT3G58240.1	Thale cress	cytosol	36.76	37.22
AT3G44805.1	Thale cress	cytosol	26.17	33.87
AT3G58220.2	Thale cress	cytosol	40.5	28.7
AT3G58430.1	Thale cress	cytosol	36.76	25.05
AT3G58440.1	Thale cress	cytosol	38.01	20.3

Protein Annotations

Gene3D:2.60.210.10	MapMan:35.1	EntrezGene:824995	UniProt:A0A178V8R6	ProteinID:AEE79760.1	ArrayExpress:AT3G58260
EnsemblPlantsGene:AT3G58260	RefSeq:AT3G58260	TAIR:AT3G58260	RefSeq:AT3G58260-TAIR-G	EnsemblPlants:AT3G58260.1	TAIR:AT3G58260.1
Unigene:At.53981	ProteinID:CAB68164.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0008150	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	RefSeq:NP_191385.1	ProteinID:OAP01393.1
PFAM:PF00917	PFscan:PS50144	PANTHER:PTHR24007	PANTHER:PTHR24007:SF12	UniProt:Q9M2J0	SMART:SM00061
SUPFAM:SSF49599	InterPro:TRAF-like	UniParc:UPI00000A2A4E	SEG:seg	:	:

Description

MATH domain and coiled-coil domain-containing protein At3g58260 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2J0]

Coordinates

chr3:-:21573754..21575369

Molecular Weight (calculated)

36259.0 Da

IEP (calculated)

4.915

GRAVY (calculated)

-0.105

Length

321 amino acids

Sequence
(BLAST)

001: MGKQINNTFT WVIKNLSTLQ GLEVRSKIFV VGGCKWRLIA YPEVNDADGY LSLSVYLGVP DCCESLPSGW KRHAKFSLTI VNQLSEGLSQ VQETQAWFDE
101: NAPGWGFPPM LNLKDVSDKY GGFLVNDEVM VAVAVDVIEV VGSLDAPEMS ESMDIKGFKV LPSQVKSVNR LFESHPDIAS KFSIKNQSLK TAYMNVLLCL
201: AETLHQSPME ISEDDLSDAK TTLAYMKSVG FKLDWLEKKL DELFEKKKEE ADKIRMQNIE EELKDLRQKC SSLEALLKKE KTGVLAAKAP FLFFNNVNDD
301: DLKWILRAVM YTLIMMLFIS I

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.