Factsheet for AT3G58430.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G58410.1	Thale cress	cytosol	36.73	52.74
AT3G58340.1	Thale cress	cytosol	32.91	47.69
AT3G58200.1	Thale cress	cytosol	31.42	46.4
AT2G05400.3	Thale cress	cytosol	21.23	46.08
AT3G58360.1	Thale cress	cytosol	28.03	44.3
AT2G05410.2	Thale cress	cytosol	28.45	44.22
AT3G44790.1	Thale cress	cytosol	29.94	43.52
AT3G58350.1	Thale cress	cytosol	27.6	43.19
AT3G58210.1	Thale cress	plastid	30.15	43.03
AT3G58370.1	Thale cress	cytosol	27.18	42.38
AT1G31390.1	Thale cress	cytosol	23.78	41.79
AT2G05420.1	Thale cress	cytosol	26.33	41.75
AT3G58400.1	Thale cress	extracellular	25.9	41.64
AT1G31400.1	Thale cress	cytosol	24.42	41.37
AT1G31380.1	Thale cress	cytosol	15.29	41.14
AT3G27040.1	Thale cress	cytosol	23.35	40.59
AT3G58250.1	Thale cress	cytosol	26.96	40.06
AT3G44800.1	Thale cress	cytosol	29.09	40.06
AT2G01790.1	Thale cress	cytosol	22.51	39.41
AT3G58270.3	Thale cress	cytosol	28.45	39.07
AT3G58380.1	Thale cress	cytosol	25.27	38.76
AT3G29580.1	Thale cress	cytosol	25.05	38.56
AT1G31370.1	Thale cress	cytosol	15.71	38.34
AT3G58320.1	Thale cress	nucleus	18.05	37.95
AT3G44805.1	Thale cress	cytosol	19.75	37.5
AT3G58260.1	Thale cress	cytosol, golgi, mitochondrion, plastid	25.05	36.76
AT3G58240.1	Thale cress	cytosol	23.35	34.7
AT3G58220.2	Thale cress	cytosol	29.3	30.46
AT3G58440.1	Thale cress	cytosol	31.63	24.79

Protein Annotations

Gene3D:2.60.210.10	MapMan:35.1	EntrezGene:825012	ArrayExpress:AT3G58430	EnsemblPlantsGene:AT3G58430	RefSeq:AT3G58430
TAIR:AT3G58430	RefSeq:AT3G58430-TAIR-G	EnsemblPlants:AT3G58430.1	TAIR:AT3G58430.1	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	PFAM:PF00917
PO:PO:0000293	PFscan:PS50144	PANTHER:PTHR24007	PANTHER:PTHR24007:SF12	SUPFAM:SSF49599	InterPro:TRAF-like
UniParc:UPI000848E289	SEG:seg	:	:	:	:

Description

TRAF-like family protein [Source:TAIR;Acc:AT3G58430]

Coordinates

chr3:-:21613683..21616183

Molecular Weight (calculated)

53864.7 Da

IEP (calculated)

4.994

GRAVY (calculated)

-0.244

Length

471 amino acids

Sequence
(BLAST)

001: MEKQAHKKFC WIIKNFSPQS ERLYSVPVLI GDCKWRPIAY PIRDKYFSLC LQVVDFESLP CGWGRYVELR LTLRNQHNSL NLSIKADHCF DEKRTTWGIP
101: IPERIPICKL QTELYQSEHV VKGDFKIIAE VDVFEAVGTL TESDISGKAS ELLTKKIRND GNESGDLLKK TSPEKESNHV NESKPVRKLR NFVVLYKRHA
201: AMCSVLQEPI CLLGIFHYTN GEASWAEVRV GVFLLNMTLC LPDSQLFPSE VVKARLTIVN QLSEKLSISK ESEHCFDEQN PTLGYTFPYE LLVEDGGFLV
301: NEDLMIIVEV IGASDVFEDS STQGKVDVNG FQVLPSQVEY VRSIFERHPD IAVEFRAKNQ HLRTSCMIFL LSLIETLCQS LEELSNEDLV EADIALTYVK
401: DAGFKVDWLE KKLDQVKEKK EKELSDMVQL QEMEDHLLKL KQSCSDLDDL VVKKKDELSV TRSPLSFDDV V

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.