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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • cytosol 2
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT3G44800.1 Thale cress cytosol 70.06 66.37
CDX69523 Canola cytosol 49.69 57.09
AT3G58200.1 Thale cress cytosol 55.86 56.74
AT3G44805.1 Thale cress cytosol 43.21 56.45
AT3G58210.1 Thale cress plastid 56.79 55.76
AT3G58370.1 Thale cress cytosol 49.69 53.31
Bra008697.1-P Field mustard plastid 29.32 52.78
AT3G58350.1 Thale cress cytosol 48.77 52.49
AT3G58270.3 Thale cress cytosol 54.94 51.9
AT3G58360.1 Thale cress cytosol 47.53 51.68
CDY09631 Canola cytosol 16.67 51.43
AT2G05400.3 Thale cress cytosol 33.95 50.69
AT3G58250.1 Thale cress cytosol 49.38 50.47
AT3G58410.1 Thale cress cytosol 50.93 50.3
AT3G58340.1 Thale cress cytosol 49.07 48.92
AT2G05410.2 Thale cress cytosol 45.68 48.84
AT2G05420.1 Thale cress cytosol 44.75 48.82
AT1G31380.1 Thale cress cytosol 25.62 47.43
AT1G31390.1 Thale cress cytosol 39.2 47.39
AT3G58400.1 Thale cress extracellular 42.59 47.1
AT3G29580.1 Thale cress cytosol 44.14 46.73
Bra012666.1-P Field mustard cytosol 38.89 46.32
CDX90477 Canola cytosol 38.89 46.32
AT3G58260.1 Thale cress cytosol, golgi, mitochondrion, plastid 45.68 46.11
AT2G01790.1 Thale cress cytosol 37.65 45.35
AT1G31400.1 Thale cress cytosol 38.58 44.96
AT3G27040.1 Thale cress cytosol 37.35 44.65
AT1G31370.1 Thale cress cytosol 24.38 40.93
AT3G58380.1 Thale cress cytosol 38.58 40.72
AT3G58240.1 Thale cress cytosol 38.58 39.43
AT3G58320.1 Thale cress nucleus 26.23 37.95
AT3G58220.2 Thale cress cytosol 49.38 35.32
AT3G58430.1 Thale cress cytosol 43.52 29.94
AT3G58440.1 Thale cress cytosol 41.05 22.13
Protein Annotations
Gene3D:2.60.210.10MapMan:35.1EntrezGene:823610ProteinID:AAB70028.1ProteinID:AEE77954.1ArrayExpress:AT3G44790
EnsemblPlantsGene:AT3G44790RefSeq:AT3G44790TAIR:AT3G44790RefSeq:AT3G44790-TAIR-GEnsemblPlants:AT3G44790.1TAIR:AT3G44790.1
ncoils:CoilUniProt:F4J4A0GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0008150
InterPro:IPR002083InterPro:IPR008974InterPro:MATH/TRAF_domRefSeq:NP_190065.1PFAM:PF00917PFscan:PS50144
PANTHER:PTHR24007PANTHER:PTHR24007:SF12SMART:SM00061SUPFAM:SSF49599InterPro:TRAF-likeUniParc:UPI00001636BC
SEG:seg:::::
Description
MATH domain and coiled-coil domain-containing protein At3g44790 [Source:UniProtKB/Swiss-Prot;Acc:F4J4A0]
Coordinates
chr3:+:16328697..16330535
Molecular Weight (calculated)
37265.0 Da
IEP (calculated)
8.101
GRAVY (calculated)
-0.422
Length
324 amino acids
Sequence
(BLAST)
001: MGYEKFTWVI KNFSSLQSKY INSDKFVIGG CKWFLKGYQN ANYLSLFLMV ATSKTLPCGW RRYTRFRLTV VNQLSDELSQ QRETETWFDQ NVVLSGNRHM
101: ISLTKLNAKK GGFLVNNEVK IVVEVDVLQV IGKLDVSEGS QEVTQPLKRI RLNDDGVSVK QSIDVNGFQV LPSQVESVKR IFERHPNMAL EFRAKNQHVR
201: TSCMNVLLSL IDTLCQSLQD ISIDDLGQAE KALRYLKDSD FKVDWLERKL EEVKEKKMEE QIGKSRMQEL EEELKIFKQK CSDIEAQLEK EKQKCSDIEA
301: LLEKEKAKSL AAARAPPLTL DDVV
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.