Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012666.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY09631 | Canola | cytosol | 23.9 | 61.9 |
| CDX88982 | Canola | cytosol | 25.0 | 58.12 |
| CDX69523 | Canola | cytosol | 54.04 | 52.13 |
| CDY00561 | Canola | cytosol | 25.37 | 46.0 |
| CDX88985 | Canola | extracellular | 30.88 | 43.75 |
| CDY06044 | Canola | cytosol | 39.34 | 43.5 |
| CDX71960 | Canola | cytosol | 22.79 | 43.06 |
| CDY00562 | Canola | cytosol | 37.5 | 42.86 |
| CDY23318 | Canola | cytosol | 41.18 | 42.26 |
| AT3G58210.1 | Thale cress | plastid | 51.1 | 42.12 |
| CDY53703 | Canola | cytosol | 41.91 | 41.91 |
| CDX67729 | Canola | cytosol | 40.81 | 41.42 |
| CDX67741 | Canola | cytosol | 27.21 | 40.88 |
| CDY23317 | Canola | cytosol | 40.81 | 40.81 |
| AT3G58200.1 | Thale cress | cytosol | 47.79 | 40.75 |
| CDX67732 | Canola | cytosol | 41.91 | 39.72 |
| CDY06045 | Canola | cytosol | 44.49 | 39.54 |
| CDX98280 | Canola | cytosol | 41.54 | 39.37 |
| AT3G44790.1 | Thale cress | cytosol | 46.32 | 38.89 |
| CDY00566 | Canola | cytosol | 41.18 | 38.62 |
| CDX88981 | Canola | extracellular | 30.51 | 38.25 |
| CDX67730 | Canola | cytosol | 41.54 | 38.05 |
| CDY17006 | Canola | cytosol | 36.03 | 37.55 |
| CDY52912 | Canola | cytosol | 40.81 | 37.25 |
| CDX98281 | Canola | cytosol | 33.46 | 36.84 |
| CDY00554 | Canola | cytosol | 37.13 | 36.73 |
| CDY06047 | Canola | cytosol | 43.75 | 36.5 |
| CDX88978 | Canola | cytosol | 36.76 | 36.5 |
| CDX88983 | Canola | cytosol | 37.13 | 36.46 |
| CDX88984 | Canola | cytosol | 41.18 | 36.01 |
| CDY00567 | Canola | plastid | 25.74 | 35.18 |
| CDX98279 | Canola | cytosol | 34.56 | 34.81 |
| CDX98282 | Canola | cytosol | 32.72 | 34.5 |
| CDX98291 | Canola | cytosol | 36.4 | 34.38 |
| AT3G44800.1 | Thale cress | cytosol | 43.01 | 34.21 |
| CDY06042 | Canola | cytosol | 38.6 | 34.09 |
| CDX67742 | Canola | cytosol | 38.6 | 33.65 |
| AT3G44805.1 | Thale cress | cytosol | 30.51 | 33.47 |
| CDX71958 | Canola | cytosol | 35.66 | 32.23 |
| CDY00564 | Canola | cytosol | 22.79 | 32.12 |
| CDX67733 | Canola | cytosol | 38.6 | 32.11 |
| CDX98278 | Canola | cytosol | 25.74 | 31.96 |
| CDY00560 | Canola | cytosol | 11.76 | 29.91 |
| CDX84400 | Canola | nucleus | 12.87 | 28.69 |
| CDX98283 | Canola | mitochondrion | 41.54 | 28.39 |
| AT3G58220.2 | Thale cress | cytosol | 47.06 | 28.26 |
| CDX67728 | Canola | cytosol | 4.04 | 26.19 |
| CDY17817 | Canola | cytosol | 15.81 | 24.16 |
| CDY06043 | Canola | cytosol, golgi, mitochondrion, peroxisome | 37.13 | 23.99 |
| CDX67734 | Canola | cytosol | 34.93 | 20.79 |
| CDX98294 | Canola | plastid | 28.68 | 20.53 |
| CDY06046 | Canola | cytosol | 42.65 | 20.1 |
| CDX67743 | Canola | nucleus | 30.51 | 19.86 |
| CDY00558 | Canola | cytosol | 43.75 | 19.83 |
| CDX88980 | Canola | cytosol | 43.75 | 19.83 |
| CDX98284 | Canola | cytosol | 38.6 | 17.92 |
| CDX71959 | Canola | cytosol | 39.34 | 17.57 |
| CDY00559 | Canola | nucleus | 8.82 | 12.24 |
Protein Annotations
| EnsemblPlants:CDX90477 | EnsemblPlantsGene:GSBRNA2T00151093001 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | ncoils:Coil | PANTHER:PTHR24007 |
| PANTHER:PTHR24007:SF12 | PFAM:PF00917 | PFscan:PS50144 | ProteinID:CDX90477 | ProteinID:CDX90477.1 | SEG:seg |
| SUPFAM:SSF49599 | UniParc:UPI0002540998 | MapMan:35.1 | : | : | : |
Description
BnaA03g43040D
Coordinates
chrLK031863:-:439132..440383
Molecular Weight (calculated)
30692.1 Da
IEP (calculated)
6.898
GRAVY (calculated)
-0.252
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDDIKFTWV IKNFSSLESK KSYSDQVVGS GCKWSLMAYP GENSKASTLC LAIWVNDGPN VRSGWSEHAK LSCTIVNKNP EKVSQMEETY CAERTKWGFR
101: FISIIPLSEL EDENGGFIVN GEVKIVVELE IFVLVKQTLN NTKLNDKGDL VDVNGFQVLP SQVTFARRIF EKHSDVALVL RAKNKHLRTA CMNVLLCLIE
201: TLCLGPGELS SEDLVEADNA LAYVKNAGFK VDWLEKKLTK VKENKKMVHI GETRMRELEE ELKNLKQKSL EV
101: FISIIPLSEL EDENGGFIVN GEVKIVVELE IFVLVKQTLN NTKLNDKGDL VDVNGFQVLP SQVTFARRIF EKHSDVALVL RAKNKHLRTA CMNVLLCLIE
201: TLCLGPGELS SEDLVEADNA LAYVKNAGFK VDWLEKKLTK VKENKKMVHI GETRMRELEE ELKNLKQKSL EV
001: MGNLVDNKFT WVIQNFSSSQ SRVVPSNQFV IGGCKWRLLV YPEGFNKSGD HLSLFLEVAD PRSLPPGWSR HARYLLTIVN QHSDKISKRN EATKWFNQKI
101: PGWGLSAMIP LTKLHAKDGG FLVNDELKIV AEVNVLEVIG KLDVPEESEE ETQVTQPMKK VKVDYDHVES NDLMINETPP VSELMDVNGF QVLPSQVDFV
201: KRIFEKHPDI AKDFRPKNPH LRKACMNFLL SLMETLCQPP QKLSNEDLVE ADNALTYVKV SGFKVDWLEK KLEEVKKKKE EEQTGEARIQ ELEEELKEFK
301: QKCLDREAML EKEKAKVLTA RAPLTLDDVI
101: PGWGLSAMIP LTKLHAKDGG FLVNDELKIV AEVNVLEVIG KLDVPEESEE ETQVTQPMKK VKVDYDHVES NDLMINETPP VSELMDVNGF QVLPSQVDFV
201: KRIFEKHPDI AKDFRPKNPH LRKACMNFLL SLMETLCQPP QKLSNEDLVE ADNALTYVKV SGFKVDWLEK KLEEVKKKKE EEQTGEARIQ ELEEELKEFK
301: QKCLDREAML EKEKAKVLTA RAPLTLDDVI
Arabidopsis Description
MATH domain and coiled-coil domain-containing protein At3g58210 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2J5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.