Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67728 | Canola | cytosol | 23.81 | 59.52 |
| CDX84400 | Canola | nucleus | 34.29 | 29.51 |
| CDX88982 | Canola | cytosol | 32.38 | 29.06 |
| CDX67741 | Canola | cytosol | 42.86 | 24.86 |
| CDY00561 | Canola | cytosol | 35.24 | 24.67 |
| CDX90477 | Canola | cytosol | 61.9 | 23.9 |
| CDX71960 | Canola | cytosol | 32.38 | 23.61 |
| CDX88985 | Canola | extracellular | 42.86 | 23.44 |
| CDY17817 | Canola | cytosol | 39.05 | 23.03 |
| CDX69523 | Canola | cytosol | 60.95 | 22.7 |
| CDY00567 | Canola | plastid | 41.9 | 22.11 |
| CDX88981 | Canola | extracellular | 43.81 | 21.2 |
| AT3G58210.1 | Thale cress | plastid | 60.0 | 19.09 |
| CDX67729 | Canola | cytosol | 48.57 | 19.03 |
| CDX98282 | Canola | cytosol | 45.71 | 18.6 |
| CDY00562 | Canola | cytosol | 40.0 | 17.65 |
| CDX88983 | Canola | cytosol | 44.76 | 16.97 |
| CDY17006 | Canola | cytosol | 41.9 | 16.86 |
| AT3G44790.1 | Thale cress | cytosol | 51.43 | 16.67 |
| CDX98291 | Canola | cytosol | 45.71 | 16.67 |
| CDY52912 | Canola | cytosol | 45.71 | 16.11 |
| CDX67732 | Canola | cytosol | 43.81 | 16.03 |
| CDY00559 | Canola | nucleus | 29.52 | 15.82 |
| CDX88978 | Canola | cytosol | 40.95 | 15.69 |
| AT3G58200.1 | Thale cress | cytosol | 47.62 | 15.67 |
| CDX98280 | Canola | cytosol | 41.9 | 15.33 |
| CDY00566 | Canola | cytosol | 41.9 | 15.17 |
| CDY00564 | Canola | cytosol | 27.62 | 15.03 |
| AT3G44805.1 | Thale cress | cytosol | 35.24 | 14.92 |
| CDX67730 | Canola | cytosol | 41.9 | 14.81 |
| CDY00554 | Canola | cytosol | 38.1 | 14.55 |
| CDX88984 | Canola | cytosol | 42.86 | 14.47 |
| AT3G58220.2 | Thale cress | cytosol | 61.9 | 14.35 |
| AT3G44800.1 | Thale cress | cytosol | 46.67 | 14.33 |
| CDX71958 | Canola | cytosol | 40.95 | 14.29 |
| CDY06047 | Canola | cytosol | 40.0 | 12.88 |
| CDY06042 | Canola | cytosol | 37.14 | 12.66 |
| CDY53703 | Canola | cytosol | 32.38 | 12.5 |
| CDY06045 | Canola | cytosol | 36.19 | 12.42 |
| CDX98281 | Canola | cytosol | 27.62 | 11.74 |
| CDY23318 | Canola | cytosol | 29.52 | 11.7 |
| CDY06044 | Canola | cytosol | 26.67 | 11.38 |
| CDX98283 | Canola | mitochondrion | 42.86 | 11.31 |
| CDY23317 | Canola | cytosol | 27.62 | 10.66 |
| CDY06043 | Canola | cytosol, golgi, mitochondrion, peroxisome | 39.05 | 9.74 |
| CDX98294 | Canola | plastid | 35.24 | 9.74 |
| CDX67742 | Canola | cytosol | 28.57 | 9.62 |
| CDX98279 | Canola | cytosol | 23.81 | 9.26 |
| CDX67734 | Canola | cytosol | 37.14 | 8.53 |
| CDY00558 | Canola | cytosol | 47.62 | 8.33 |
| CDX88980 | Canola | cytosol | 46.67 | 8.17 |
| CDX67733 | Canola | cytosol | 24.76 | 7.95 |
| CDX98284 | Canola | cytosol | 41.9 | 7.51 |
| CDX98278 | Canola | cytosol | 15.24 | 7.31 |
| CDY06046 | Canola | cytosol | 39.05 | 7.11 |
| CDX67743 | Canola | nucleus | 21.9 | 5.5 |
| CDX71959 | Canola | cytosol | 26.67 | 4.6 |
| CDY00560 | Canola | cytosol | 0.95 | 0.93 |
Protein Annotations
| EnsemblPlants:CDY09631 | EnsemblPlantsGene:GSBRNA2T00031276001 | ncoils:Coil | ProteinID:CDY09631 | ProteinID:CDY09631.1 | SEG:seg |
| UniParc:UPI0004EEE31F | UniProt:A0A078F8H6 | MapMan:35.2 | : | : | : |
Description
BnaC07g34300DBnaC07g34300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F8H6]
Coordinates
chrLK031998:-:116854..117171
Molecular Weight (calculated)
11947.4 Da
IEP (calculated)
5.286
GRAVY (calculated)
-0.601
Length
105 amino acids
Sequence
(BLAST)
(BLAST)
001: MHECPTLPDR NIMPGTPGEL SSEDLVEADN ALAYVKNAGF KVDWLEKKLT KVKENKKVHI GETRMRELEE ELKNLKQKSL KVEAMLEKEK ADVLAATHLT
101: LDEFV
101: LDEFV
001: MGKQLAKKIT WAIENFSSLH SKKIYSDPFI VGGCKWRFLV YPKGNNVDYL FLYLEVADYE SLSPEWRRHA RYLLNVVNQN SVKRSKQNEE QKWFDVQSPR
101: WGRLSMFPLN EINAKDSGFL VNGELKIVAE IEVLEVIGKL DVSEETSTIM ESMDFNGFQL LPSQVDFVRH MFEKHPEIAS EFRLKNPNLR AGYMSLLLSL
201: IETLRQSPQE LNKVDLAEGY VALRSITDAG FKVDWLEKKL VEISEKKNKE EAGETRMQEI NEELESLKQK CLDLEAQLEK EKAEVFAAKS PLSFNDVF
101: WGRLSMFPLN EINAKDSGFL VNGELKIVAE IEVLEVIGKL DVSEETSTIM ESMDFNGFQL LPSQVDFVRH MFEKHPEIAS EFRLKNPNLR AGYMSLLLSL
201: IETLRQSPQE LNKVDLAEGY VALRSITDAG FKVDWLEKKL VEISEKKNKE EAGETRMQEI NEELESLKQK CLDLEAQLEK EKAEVFAAKS PLSFNDVF
Arabidopsis Description
MATH domain and coiled-coil domain-containing protein At3g58360 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2I0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.