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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX88982 Canola cytosol 71.33 91.45
CDX88985 Canola extracellular 74.0 57.81
CDX67741 Canola cytosol 66.0 54.7
CDY00567 Canola plastid 69.33 52.26
CDX71960 Canola cytosol 42.67 44.44
CDX88981 Canola extracellular 53.33 36.87
CDY09631 Canola cytosol 24.67 35.24
CDX98291 Canola cytosol 67.33 35.07
CDY00566 Canola cytosol 64.67 33.45
CDX88984 Canola cytosol 64.67 31.19
CDX71958 Canola cytosol 62.0 30.9
CDY00562 Canola cytosol 47.33 29.83
CDX88983 Canola cytosol 54.67 29.6
CDY06042 Canola cytosol 60.0 29.22
CDX69523 Canola cytosol 54.0 28.72
CDX84400 Canola nucleus 23.33 28.69
CDY06044 Canola cytosol 46.0 28.05
CDY00564 Canola cytosol 35.33 27.46
CDX90477 Canola cytosol 46.0 25.37
CDX67729 Canola cytosol 44.0 24.63
CDX67730 Canola cytosol 47.33 23.91
CDY23318 Canola cytosol 42.0 23.77
CDX98282 Canola cytosol 40.67 23.64
CDY17817 Canola cytosol 27.33 23.03
CDY52912 Canola cytosol 45.33 22.82
CDX98280 Canola cytosol 42.67 22.3
CDX67732 Canola cytosol 42.0 21.95
CDX67742 Canola cytosol 44.67 21.47
CDY06045 Canola cytosol 43.33 21.24
CDX98279 Canola cytosol 38.0 21.11
CDY06043 Canola cytosol, golgi, mitochondrion, peroxisome 58.0 20.67
CDY53703 Canola cytosol 36.67 20.22
CDY23317 Canola cytosol 36.0 19.85
CDX88978 Canola cytosol 36.0 19.71
CDY00554 Canola cytosol 36.0 19.64
CDX98278 Canola cytosol 28.67 19.63
CDX98281 Canola cytosol 32.0 19.43
CDY06047 Canola cytosol 41.33 19.02
CDY00560 Canola cytosol 13.33 18.69
CDY17006 Canola cytosol 32.0 18.39
CDX67728 Canola cytosol 4.67 16.67
CDX67733 Canola cytosol 35.33 16.21
CDX67734 Canola cytosol 48.0 15.75
CDY00559 Canola nucleus 19.33 14.8
CDX67743 Canola nucleus 38.67 13.88
CDX98283 Canola mitochondrion 36.67 13.82
CDX98294 Canola plastid 31.33 12.37
CDX98284 Canola cytosol 46.67 11.95
CDX71959 Canola cytosol 48.0 11.82
CDX88980 Canola cytosol 46.67 11.67
CDY00558 Canola cytosol 45.33 11.33
CDY06046 Canola cytosol 43.33 11.27
Protein Annotations
EnsemblPlants:CDY00561EnsemblPlantsGene:GSBRNA2T00110313001ncoils:CoilPANTHER:PTHR24007PANTHER:PTHR24007:SF12ProteinID:CDY00561
ProteinID:CDY00561.1SEG:segUniParc:UPI0004EF137FMapMan:35.1::
Description
BnaC04g23640D
Coordinates
chrLK031920:-:299640..302645
Molecular Weight (calculated)
17442.4 Da
IEP (calculated)
6.992
GRAVY (calculated)
-0.035
Length
150 amino acids
Sequence
(BLAST)
001: MDVNGFQVLP SQVESVRLIF KRHPDIAVEF RAKNQHLRNA CMDFLLSLIE TMCQSLEDLS NEDLVEADIA LTYLKDAGFK VDWLEKKLDI VKDKKEKEQS
101: SLARLQEMVD SLLKLKQHYI LCVCCLIFSL GFKTRFCHCQ YHTFVSKIPI
Best Arabidopsis Sequence Match ( AT3G58410.1 )
(BLAST)
001: MNLLFFLQVL QFDQEESFTT SMTKQVGKKF AWVIKNFSSL QCKKFYSVPF QIGDCKWRLS IYPKGNNCDY LSLFLEVADF KSLPSGWRRY VKLRLYIVKQ
101: EMWGWGFLYM LPLTKLHDEK EGFLVNGELM IVAEVDALGF IDPLNESEES EDPTQPLKKI KLNDDGAVSS DLLEEASPRK ESMEVNGFQV LPSQVESVRL
201: IFERHPDIAS EFRAKNQYLR KACMDFLLSL VETLCQSLQE FSNEDLVEAD IALTYLKDAG FKVDWLEKKL DQVRDKKEKE RSCLAKLQET EETLLKLKQK
301: CTELDALMDT EKAELSAIRT PLSFEDVV
Arabidopsis Description
TRAF-like family protein [Source:TAIR;Acc:AT3G58410]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.